NGGGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCACAGTGTATCCGAAGATAACCTTGAACTTCTAATCACCC
TGCTGCTACCTCCCAAGTGCTGGGTTTATAATCATCTATCATCTTGATTG
TAATTTTTAAATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT
ATCTAGTCTATCAATTTTTATCAGTCTATGCATGCATTTGTCTACATGAG
TGTGTGTGTGTGCCTATCCCTGCACAGAGACCAGAAGAAGGTATCTGTGC
CCTTATTAATCACTTTTGGCTATCTCCTTGAGACAATGTCTCTCTCTGAA
CCCAGACCAGATTTTGAGTTTTCTGATCCAGCCTTGAAGCCAGTAAACTC
TATCATCCCACTATCTTTGTTCCCCTCGAATTTAAATGACAGATGGCAAT
TATTACGTGTGTTCTAGTAGCCAAACTCTGCTTCTCATGATTGTGCAGCA
AGTACTTGTAACTGCAAAGCTCTCACTTTACTTACCACAGCCAGCTTTCT
TCAGTGCTGGAGTTTGAAGGCTGGCCTTGTACATGCTAATAAGCACTCTA
CTAACTCAGTAATATCCCCACTTACTATATACCTTAAGCGTTCTGATAAA
TACAAGGGTATTGTATCACTACTACTATTAATCCATTAGGGATACTCCAA
TTTGCTATCAGAGTGTTTTCCTTAAATTCAGTCTTTTN

TGGCACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGCATCTCTTCTCTTACCA
ATAGGTTTATCAGACATGGAAATGCATAAAAGTTTTTGTAGCTCAGTATG
ATAATTTAATGTTCTATAGTTATTTATAGGTATCCTTATTTTCTCTCTCC
CTGGTTATTATCCCTCCCCCACTGTCTTAGTTAGAGTTTCATTGCTGTGT
AGACACCATGATCAAGGCAGGTCGTACAAAGGCTAATGTTCATTGGGGCT
GGCTTACAGTTTCAGAGGTTCAGTCTATTATCATCATGGTGGGAAGCATG
GCAGCACGCAGGCAGATATTGTACTAGAGGAGCAGAGAGTTCTGTATCTT
GATCCGTGGGCAACAGAAGGTGACTGATTCCTGCAGGGAGTCAGGAAGAG
CATCTCTTCTACACTGAGCCAAGCTTGAGCATCAAAACCAAAGCCCACCT
GCACAGTGACACACTTCCAACAAGGGCACACCTCCTAACAGTGCCACTTC
CTATGAGCCACCCATATTTAAACCACCACAGCGCAGCCACCTTTTTTTTT
CTTTTTCCTTTTTTAATTTAAGAAGCTCTTTCCCTATGAGTCTGTCAAGA
CTGGAATCTCAAGCATTGCTAATCCTCAATCCTTAGGAGGATCCTACCCT
TAAGTATTCATAGACCCAGCAATTGCACTACATA

Query= MSMg01no436_m07.g1 MSMg01no436_m07.g1 CHROMAT_FILE:
MSMg01no436_m07.g1 PHD_FILE: MSMg01no436_m07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:56 2005
         (630 letters)



>mm_chr1_76735427_76736457
          Length = 1031

 Score = 1098 bits (568), Expect = 0.0
 Identities = 577/580 (99%), Gaps = 1/580 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcatctcttctcttac-caataggtttatcagacatggaaatgcataaaagtttttgta 59
           ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcatctcttctcttacacaacaggtttatcagacatggaaatgcataaaagtttttgta 260

                                                                       
Query: 60  gctcagtatgataatttaatgttctatagttatttataggtatccttattttctctctcc 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctcagtatgataatttaatgttctatagttatttataggtatccttattttctctctcc 320

                                                                       
Query: 120 ctggttattatccctcccccactgtcttagttagagtttcattgctgtgtagacaccatg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctggttattatccctcccccactgtcttagttagagtttcattgctgtgtagacaccatg 380

                                                                       
Query: 180 atcaaggcaggtcgtacaaaggctaatgttcattggggctggcttacagtttcagaggtt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 atcaaggcaggtcgtacaaaggctaatgttcattggggctggcttacagattcagaggtt 440

                                                                       
Query: 240 cagtctattatcatcatggtgggaagcatggcagcacgcaggcagatattgtactagagg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagtctattatcatcatggtgggaagcatggcagcacgcaggcagatattgtactagagg 500

                                                                       
Query: 300 agcagagagttctgtatcttgatccgtgggcaacagaaggtgactgattcctgcagggag 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcagagagttctgtatcttgatccgtgggcaacagaaggtgactgattcctgcagggag 560

                                                                       
Query: 360 tcaggaagagcatctcttctacactgagccaagcttgagcatcaaaaccaaagcccacct 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcaggaagagcatctcttctacactgagccaagcttgagcatcaaaaccaaagcccacct 620

                                                                       
Query: 420 gcacagtgacacacttccaacaagggcacacctcctaacagtgccacttcctatgagcca 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcacagtgacacacttccaacaagggcacacctcctaacagtgccacttcctatgagcca 680

                                                                       
Query: 480 cccatatttaaaccaccacagcgcagccacctttttttttctttttccttttttaattta 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cccatatttaaaccaccacagcgcagccacctttttttttctttttccttttttaattta 740

                                                   
Query: 540 agaagctctttccctatgagtctgtcaagactggaatctc 579
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agaagctctttccctatgagtctgtcaagactggaatctc 780


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1031
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1021
Effective search space:   633020
Effective search space used:   633020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)