Query= MSMg01no437_d08.b1 MSMg01no437_d08.b1 CHROMAT_FILE:
MSMg01no437_d08.b1 PHD_FILE: MSMg01no437_d08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:30 2005
(249 letters)
>mm_chr1_20647121_20647769
Length = 649
Score = 482 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 tatgcaatttcttgcagtttggtagaatggaaaaacttgattaccaccatgttgttgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatgcaatttcttgcagtttggtagaatggaaaaacttgattaccaccatgttgttgtga 260
Query: 61 aaggtccctggtcccttgctacatagattccccccatgtggataccagtttcatcaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggtccctggtcccttgctacatagattccccccatgtggataccagtttcatcaaagt 320
Query: 121 acgaaggctgaaaagccaacaaaggctgctagcaagacagacattaaattcttatttaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acgaaggctgaaaagccaacaaaggctgctagcaagacagacattaaattcttatttaac 380
Query: 181 ctaattacagaagtggcaacttcactatattcaattagttggaaaccagttccatgcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaattacagaagtggcaacttcactatattcaattagttggaaaccagttccatgcagt 440
Query: 241 aaaaggatc 249
|||||||||
Sbjct: 441 aaaaggatc 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no437_d08.g1 MSMg01no437_d08.g1 CHROMAT_FILE:
MSMg01no437_d08.g1 PHD_FILE: MSMg01no437_d08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:30 2005
(333 letters)
>mm_chr1_20825715_20826447
Length = 733
Score = 598 bits (309), Expect = e-175
Identities = 330/341 (96%), Gaps = 8/341 (2%)
Strand = Plus / Minus
Query: 1 cttgacctgtccctaaactaaaaatcctgattaaagttaccttaatcccaagagtttaa- 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 601 cttgacctgtccctaaactaaaaatcctgattaaagttaccttaatcccaagagttcaag 542
Query: 60 ------a-gtgaatcccgggccagacagttctacatgagaacgtgtctcaagaaacaaac 112
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtcacgatgtgaatccccggccagacagttctacatgagaacgtgtctcaagaaacaaac 482
Query: 113 aaaaatcaaatcctcaaataaaataagtcttaaagttactgcaaaaaggtaaccaaagga 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaaaatcaaatcctcaaataaaataagtcttaaagttactgcaaaaaggtaaccaaagga 422
Query: 173 ggcttggggaaggaatgaagtgggaatgagggcatggagattccaagggtgtttgagggc 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggcttggggaaggaatgaagtgggaatgagggcatggagattccaagggtgtttgagggc 362
Query: 233 agctgtggggaatactccagtattcgcctgtggttgaggtgtagtgtgtccttgagtcta 292
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agctgtggggaatactccaggattcgcctgtggttgaggtgtagtgtgtccttgagtcta 302
Query: 293 taggtgtggctgctgggcatccaaggatgttggatgctgca 333
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taggtgtggctgctgggcatccaaggatgttggatgctgca 261
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
