NNTTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTGTTTAGCTCTGAGCCCCATCTTTTAATGGGGTTATTTGA
TTATCAGGAGTCCACCCTCTTGAGTTCTTTATATATATTGGATATTAGTC
CCCTATCTGATTTAAGATAGGTAAAGATCCTTTCCCAATCTATCTACTGG
CCCTTTTGTCTTATTGACAGTGTCTTTTGCCTTGCAGAACCTTTGCAGTT
TCATGAGGTCCCATTTGTCAGTCCTCGATCTTACAGCACAAGCCATTGCT
GTTCTACTCAGGAATTTTTCCCTGTGCCCATATCATCGAGGCTTTTCCCT
ACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTT
GATCCACTTAGATTTGACCTTAGTACAAGGAGATAGGAATGGATCGATTC
GCATTCTTCTACATGATAAAAACCAGCTGTGCCAGCACCATTTGTTGAAA
ATGCTGTCTTTCTTCCACTGAATGGGTTTAGCTCCCTTGTCGAAAATCAA
GTGACCATAAATGTGGGGGGTCATTTCTGGGGCCTCAATTCTATTCCATT
GGCCGGCCCCATACCAGAACCAGGCAGGTTTTTTTTTTTATTTAATTTTT
TTTTTATAAAAAATTTCCTGGGTAACATTTCTTAGGGTTCCCAAAAATGG
GAACCCCCCCCCCAAAAAAAAAAAACCACCCCCCCCTTTTTCCCTGGGTT
CTCTTGTTTTTTG

NCCAATGATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTATTTAGCAGTATGTGGTTGATTT
TTTTTTTTTATCTACAGTTATTTGTCCCAGCCTGTACTTAACAGCTTTGT
GCATGTTTGTACTGTCTCTGAAAAAAGCTCTCAGAAGTTGACCTGAGAGT
ATTGCATTTATCAGAGCTTAGACATAGGAAGAAGTATCAATACTAAGTAT
ATTATTCTTATGGATGCACTGATCAGTGTCATGCTTTGTATATTAGAGTT
TAAGTAATCAGATTCCTTATTTCTGGCATATTCAAAGATCAATAGCAAAC
CTTTAAGCATTATTAAATTACATATGTCTTGGGGCAAGAAAACAAGTTAT
TCTTTTATATTACATAGGATGGGGAGTGGACAAAATTAAGTAACATAATT
TCAAACACCAATATTTGTGTAAATTTCATTAAAAACCATCTGTTTTATAC
CAATTTTATTTAAATTCAATTACTATTTTATAATCCAATTTCTGTCCGTA
TCAATGATATATTCATATTTGTGAGAAAAAACTGCATGAAAAGCTTGTAA
ACTTCTACCCAATTTTTCCAAATTAATTTTTGAAAAATATGCTCCCCCAA
AATATAAAAAGGAAAGAAATTATTGTGTTCCCCCTTTTTTTGTAACCCCA
AAATAAAAAAGGGTTCCCCTTCCCTTTAAAAAATGGGGCCGGCCTTTTTG
GTTTTACAACGGAAAATTTGTGG

Query= MSMg01no437_p23.g1 MSMg01no437_p23.g1 CHROMAT_FILE:
MSMg01no437_p23.g1 PHD_FILE: MSMg01no437_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:35 2005
         (457 letters)



>mm_chr1_110863058_110863911
          Length = 854

 Score =  861 bits (445), Expect = 0.0
 Identities = 453/457 (99%), Gaps = 3/457 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctatttagcagtatgtggttgattttttttttttatctacagttatttgtcccagcctgt 60
           |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||
Sbjct: 201 ctatttagcagtatgtggttgattttttttt---atctacagttatttgtcccagcctgt 257

                                                                       
Query: 61  acttaacagctttgtgcatgtttgtactgtctctgaaaaaagctctcagaagttgacctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 acttaacagctttgtgcatgtttgtactgtctctgaaaaaagctctcagaagttgacctg 317

                                                                       
Query: 121 agagtattgcatttatcagagcttagacataggaagaagtatcaatactaagtatattat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 agagtattgcatttatcagagcttagacataggaagaagtatcaatactaagtatattat 377

                                                                       
Query: 181 tcttatggatgcactgatcagtgtcatgctttgtatattagagtttaagtaatcagattc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tcttatggatgcactgatcagtgtcatgctttgtatattagagtttaagtaatcagattc 437

                                                                       
Query: 241 cttatttctggcatattcaaagatcaatagcaaacctttaagcattattaaattacatat 300
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cttatttctggcataatcaaagatcaatagcaaacctttaagcattattaaattacatat 497

                                                                       
Query: 301 gtcttggggcaagaaaacaagttattcttttatattacataggatggggagtggacaaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gtcttggggcaagaaaacaagttattcttttatattacataggatggggagtggacaaaa 557

                                                                       
Query: 361 ttaagtaacataatttcaaacaccaatatttgtgtaaatttcattaaaaaccatctgttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ttaagtaacataatttcaaacaccaatatttgtgtaaatttcattaaaaaccatctgttt 617

                                                
Query: 421 tataccaattttatttaaattcaattactattttata 457
           |||||||||||||||||||||||||||||||||||||
Sbjct: 618 tataccaattttatttaaattcaattactattttata 654


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 854
Length adjustment: 10
Effective length of query: 447
Effective length of database: 844
Effective search space:   377268
Effective search space used:   377268
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)