XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTG
TCTTTGGTATACACCAAAGCAAAACAAAGATAAACAATGATCTGACCCAG
TTTTGAAACAGCCCAGCTCCCCAGAGGCAGATCACATAGCTGTCCCATGA
AGTAGCAAACAGAACACAGCTGACCCTCTGTATGAACTTTCTCTTGACAT
AAAAGTTGGGTTAACAATAGTCGGGCAATGAGAACACCACCGAGCACACA
TTGAATTCATGTCTGCAGACAGATGTGAGCATGTGCAGCAAGCCCTCTGC
CAGGTGCTTCAGAGGATGCGGCTTTAGAAAACACCTTTCCTTCCGGGTTT
GTGGAAAGATGTAGTCATCTGACCTGGCCATCATCAAAGACCATGCCAAC
GTGAACACTGCCCGTATGCTGCTGGGCAGAACACATAGGGATGGAGGCTG
GGCTCTAGGCTCTAGGAGACCAAGGTCTCCCACTCCCACTCCCAGCCTGT
AACCTTGAAAGACAGCTGTGGAGGCCAGGGGAAGTGACCAGCTAACTCTG
TGAGCCCCTCTGGCCATGAGAGAGGAAGACCATTACCAGCTGCTTTTAAC
TAGCAGCAGGGACGGACAGAGGAGCCTCCCCCTCAGGATTAGTCCCACTC
AGCACGAGGGTAACTTGTACTGGGCCTATTTGATAATTGGGATTTTGACA
TTACCGTAACCAAGTGGAACAGACCTCTGTGTTTGTGAAAATGACCCCCC
CTACCCCCCTTAAT

TCCGTCCATTCCCCTTTTCCCCTACCCATCCCCTACCACCAAACAGCCAC
ACTTCATTTTTCTCCCTTTATTTTTATTTCCTCCCCCACCCTCATAACCG
CTTGCTCTTCTTTTCACCCTACCCATTGCATCCCCCACCCACACTAGATC
CTCACACACAGCAATGATGACAAACAAATCACACCCCAAAAATCAAGTGA
ATTAATAATTTTACACTATTTACTCTTTTACAGAATTATAATCCTTATAG
TAAATACTTTAACAATGCGATTCACGTCTTTACCCTCTTAAATCCTCGTA
AATATTCGTCCCGAACATACTACCGACCCGGATTTCCGTTAACGGACAAA
CGATTCCTGCCCCTTTCTCCGTTCGATCTTACCGCCGTTCGAAAACTCGC
CTACCAACCCGTATCGCGAATAGACATCACGACGCTCGAAAACGATATAC
ATAAAAACGACGCCAACGAAACACCACGGCGCTCCGTACAACACGACATT
CCCCCCCCCACACCGCTAACCCCCTCCGACAACCCCGCATCCATCAACCC
CCCTTCTTTCCTCACACTTCGCTCATTCCTCGTTCCTTTTCCCCACCTCT
TCCACGCCACACCCATAAATACACCACTTCACTCCTACCACTCTCTTCTA
CTCCATCGCCCGACCGCCTATTCCCCTTACTAATTTTAGCTCTCTTAACA
TCTCCCATTCTCCCATAACGTAACTCCTTTCCTCCTCTCTCTCCCCTTCC
CCCTCTCTTCTCTCCACCTCTTATTAATTTGTTCTCATTTCATATCTATC
ACTATTCTGATATGCACACCCCTGCACCCTCCTTACAATTCTACCTCTCC
CATCACAATTTGACTATGCTCTCTTCCCTACCCTCCTGTTCTCCCATCGC
CTAACCTTCTTAATCACTATTTCATTCATATTCCTCTTACCCCCATCTCT
TTCTTTTCCTCTTACCATCTTCCTTCTTCATCCTGAACACAATTCCTCGA
C

Query= MSMg01no438_c08.b1 MSMg01no438_c08.b1 CHROMAT_FILE:
MSMg01no438_c08.b1 PHD_FILE: MSMg01no438_c08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:48 2005
         (555 letters)



>mm_chr1_91440212_91441165
          Length = 954

 Score = 1027 bits (531), Expect = 0.0
 Identities = 546/551 (99%), Gaps = 1/551 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgtctttggtatacaccaaagcaaaacaaagataaacaatgatctgacccagtt 64
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 gaattctgtctttggtatagaccaaagcaaaacaaagataaacaatgatctgacccagtt 695

                                                                       
Query: 65  ttgaaacagcccagctccccagaggcagatcacatagctgtcccatgaagtagcaaacag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 ttgaaacagcccagctccccagaggcagatcacatagctgtcccatgaagtagcaaacag 635

                                                                       
Query: 125 aacacagctgaccctctgtatgaactttctcttgacataaaagttgggttaacaatagtc 184
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 634 aacacagctgaccctctgtatgaactttctcttgacataaaagtt-ggttaacaatagtc 576

                                                                       
Query: 185 gggcaatgagaacaccaccgagcacacattgaattcatgtctgcagacagatgtgagcat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gggcaatgagaacaccaccgagcacacattgaattcatgtctgcagacagatgtgagcat 516

                                                                       
Query: 245 gtgcagcaagccctctgccaggtgcttcagaggatgcggctttagaaaacacctttcctt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gtgcagcaagccctctgccaggtgcttcagaggatgcggctttagaaaacacctttcctt 456

                                                                       
Query: 305 ccgggtttgtggaaagatgtagtcatctgacctggccatcatcaaagaccatgccaacgt 364
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ccaggtttgtggaaagatgtagtcatctgacctggccatcatcaaagaccatgccaacgt 396

                                                                       
Query: 365 gaacactgcccgtatgctgctgggcagaacacatagggatggaggctgggctctaggctc 424
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 395 gaacactgcccgtatgctgctgggcagaactcatagggatggaggctgggctctaggctc 336

                                                                       
Query: 425 taggagaccaaggtctcccactcccactcccagcctgtaaccttgaaagacagctgtgga 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 taggagaccaaggtctcccactcccactcccagcctgtaaccttgaaagacagctgtgga 276

                                                                       
Query: 485 ggccaggggaagtgaccagctaactctgtgagcccctctggccatgagagaggaagacca 544
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ggccagggaaagtgaccagctaactctgtgagcccctctggccatgagagaggaagacca 216

                      
Query: 545 ttaccagctgc 555
           |||||||||||
Sbjct: 215 ttaccagctgc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 954
Length adjustment: 10
Effective length of query: 545
Effective length of database: 944
Effective search space:   514480
Effective search space used:   514480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)