MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-440O14
Chromosome	1 (Build37)
Map Location	94,234,311 - 94,234,652
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Espnl, Klhl30, BC056923, Ilkap, 1700020N18Rik, Hes6, Per2, Traf3ip1, Asb1, Twist2, Hdac4
Downstream gene	LOC100040419, LOC665883, Ndufa10, Olfr1416, Olfr1415, Olfr1414, Olfr1413, Olfr1412, Olfr1411, Olfr1410, Olfr12, Myeov2, Otos, Gpc1, Ankmy1, Dusp28, LOC100040511, Rnpepl1, Capn10, Gpr35, Aqp12, Kif1a, Agxt, 2310007B03Rik, E030010N08Rik, Sned1, Mterfd2, LOC665966, Pask
Link	Open Mouse BAC browser

Click to get alignment info.

name	Espnl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227357 MGI:2685402
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Klhl30 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70788 MGI:1918038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC056923 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227358 MGI:3606476
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ilkap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67444 MGI:1914694
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700020N18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67086 MGI:1914336
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Hes6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55927 MGI:1859852
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Per2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18627 MGI:1195265
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Traf3ip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74019 MGI:1921269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65247 MGI:1929735
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Twist2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13345 MGI:104685
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hdac4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208727 MGI:3036234
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040419 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040419
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC665883 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Ndufa10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67273 MGI:1914523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr1416 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:259040 MGI:3031250
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr1415 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258228 MGI:3031249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr1414 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:259041 MGI:3031248
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr1413 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:259039 MGI:3031247
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr1412 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258274 MGI:3031246
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr1411 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258483 MGI:3031245
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr1410 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258484 MGI:3031244
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:257890 MGI:107863
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myeov2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66915 MGI:1914165
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 143 ESTs

name	Otos (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:260301 MGI:2672814
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14733 MGI:1194891
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ankmy1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241158 MGI:3045261
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dusp28 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67446 MGI:1914696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040511 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040511
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Rnpepl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108657 MGI:1914170
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Capn10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23830 MGI:1344392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr35 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64095 MGI:1929509
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aqp12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208760 MGI:2664636
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kif1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16560 MGI:108391
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Agxt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11611 MGI:1329033
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310007B03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71874 MGI:1919124
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E030010N08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381284 MGI:3045962
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 Protein

name	Sned1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208777 MGI:3045960
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mterfd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69821 MGI:1918355
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665966 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665966
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 2 Proteins pseudo : _no_value

name	Pask (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269224 MGI:2155936
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Espnl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386086 GeneID:227357 MGI:2685402
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : espin-like transcript_id : NM_001033292.2

name	Klhl30 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802195 GeneID:70788 MGI:1918038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kelch-like 30 (Drosophila) transcript_id : NM_027551.2

name	BC056923 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248543 GeneID:227358 MGI:3606476
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC056923 transcript_id : NM_173395.2

name	Ilkap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129850 GeneID:67444 MGI:1914694
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin-linked kinase-associated serine/threonine phosphatase 2C transcript_id : NM_023343.2

name	1700020N18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363817 GeneID:67086 MGI:1914336
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 1700020N18 gene transcript_id : XM_979611.1

name	Hes6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369243 GeneID:55927 MGI:1859852
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hairy and enhancer of split 6 (Drosophila) transcript_id : NM_019479.3

name	Per2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350522 GeneID:18627 MGI:1195265
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : period homolog 2 (Drosophila) transcript_id : NM_011066.2

name	Traf3ip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:63147417 GeneID:74019 MGI:1921269
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TNF receptor-associated factor 3 interacting protein 1 transcript_id : NM_028718.1

name	Asb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:103472023 GeneID:65247 MGI:1929735
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCS box-containing protein 1 transcript_id : NM_001039126.2

name	Asb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:103472020 GeneID:65247 MGI:1929735
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCS box-containing protein 1 transcript_id : NM_023046.4

name	Twist2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131151 GeneID:13345 MGI:104685
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : twist homolog 2 (Drosophila) transcript_id : NM_007855.2

name	Hdac4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402200 GeneID:208727 MGI:3036234
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : histone deacetylase 4 transcript_id : NM_207225.1

name	Ndufa10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13195623 GeneID:67273 MGI:1914523
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10 transcript_id : NM_024197.1

name	Olfr1416 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22128868 GeneID:259040 MGI:3031250
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 1416 transcript_id : NM_147038.1

name	Olfr1415 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58372123 GeneID:258228 MGI:3031249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 1415 transcript_id : NM_001011525.1

name	Olfr1414 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22128870 GeneID:259041 MGI:3031248
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 1414 transcript_id : NM_147039.1

name	Olfr1413 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22128874 GeneID:259039 MGI:3031247
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 1413 transcript_id : NM_147037.1

name	Olfr1412 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129728 GeneID:258274 MGI:3031246
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 1412 transcript_id : NM_146277.1

name	Olfr1411 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239103 GeneID:258483 MGI:3031245
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 1411 transcript_id : NM_146490.1

name	Olfr1410 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239101 GeneID:258484 MGI:3031244
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 1410 transcript_id : NM_146491.1

name	Olfr12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46047463 GeneID:257890 MGI:107863
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 12 transcript_id : NM_206896.1

name	Myeov2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149234223 GeneID:66915 MGI:1914165
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 143 ESTs product : myeloma overexpressed 2 transcript_id : XM_888711.3

name	Otos (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71896643 GeneID:260301 MGI:2672814
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : otospiralin transcript_id : NM_153114.2

name	Gpc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802707 GeneID:14733 MGI:1194891
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glypican 1 transcript_id : NM_016696.2

name	Ankmy1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142356868 GeneID:241158 MGI:3045261
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and MYND domain containing 1 transcript_id : NM_172850.2

name	Dusp28 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75750527 GeneID:67446 MGI:1914696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual specificity phosphatase 28 transcript_id : NM_175118.3

name	LOC100040511 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234195 GeneID:100040511
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100040511 transcript_id : XM_001474840.1

name	Rnpepl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340969 GeneID:108657 MGI:1914170
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arginyl aminopeptidase (aminopeptidase B)-like 1 transcript_id : NM_181405.2

name	Capn10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87080822 GeneID:23830 MGI:1344392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calpain 10 transcript_id : NM_011796.2

name	Gpr35 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142356082 GeneID:64095 MGI:1929509
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 35 transcript_id : NM_022320.3

name	Aqp12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:29243943 GeneID:208760 MGI:2664636
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aquaporin 12 transcript_id : NM_177587.1

name	Kif1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801924 GeneID:16560 MGI:108391
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kinesin family member 1A transcript_id : NM_008440.2

name	Agxt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111038129 GeneID:11611 MGI:1329033
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alanine-glyoxylate aminotransferase transcript_id : NM_016702.2

name	2310007B03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803386 GeneID:71874 MGI:1919124
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310007B03 gene transcript_id : NM_172411.3

name	E030010N08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149234197 GeneID:381284 MGI:3045962
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 Protein product : RIKEN cDNA E030010N08 gene transcript_id : XM_001474855.1

name	Sned1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254324 GeneID:208777 MGI:3045960
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sushi, nidogen and EGF-like domains 1 transcript_id : NM_172463.3

name	Mterfd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46852399 GeneID:69821 MGI:1918355
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MTERF domain containing 2 transcript_id : NM_178051.3

name	Pask (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:18497291 GeneID:269224 MGI:2155936
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PAS domain containing serine/threonine kinase transcript_id : NM_080850.1

name	Espnl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701794 CCDS:CCDS15160.1 GeneID:227357 MGI:2685402
definition	codon_start : 1 product : espin-like protein_id : NP_001028464.1

name	Klhl30 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037217 CCDS:CCDS15161.1 GeneID:70788 MGI:1918038
definition	codon_start : 1 product : kelch-like 30 protein_id : NP_081827.1

name	BC056923 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248544 GeneID:227358 MGI:3606476
definition	codon_start : 1 product : hypothetical protein LOC227358 protein_id : NP_775571.2

name	Ilkap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930415 CCDS:CCDS15162.1 GeneID:67444 MGI:1914694
definition	GO_component : GO:0008287 - protein serine/threonine phosphatase complex [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0006470 - protein amino acid dephosphorylation [Evidence IEA] codon_start : 1 product : integrin-linked kinase-associated serine/threonine phosphatase 2C protein_id : NP_075832.1

name	1700020N18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363818 GeneID:67086 MGI:1914336
definition	codon_start : 1 product : hypothetical protein LOC67086 protein_id : XP_984705.1

name	Hes6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506777 CCDS:CCDS15163.1 GeneID:55927 MGI:1859852
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003712 - transcription cofactor activity [Evidence IDA]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IDA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA] [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : hairy and enhancer of split 6 protein_id : NP_062352.1

name	Per2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755028 GeneID:18627 MGI:1195265
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IPI] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0000155 - two-component sensor activity [Evidence IEA] GO_process : GO:0007623 - circadian rhythm [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0048511 - rhythmic process [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 exception : mismatches in translation note : period 2 product : period homolog 2 protein_id : NP_035196.1

name	Traf3ip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63147418 GeneID:74019 MGI:1921269
definition	GO_component : GO:0005829 - cytosol [Evidence ISS]; GO:0015630 - microtubule cytoskeleton [Evidence ISS] GO_function : GO:0008017 - microtubule binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS]; GO:0005102 - receptor binding [Evidence ISS]; GO:0015631 - tubulin binding [Evidence ISS] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0042527 - negative regulation of tyrosine phosphorylation of Stat6 protein [Evidence ISS]; GO:0051101 - regulation of DNA binding [Evidence ISS] codon_start : 1 note : microtubule-interacting protein that associates with TRAF3 product : TNF receptor-associated factor 3 interacting protein 1 protein_id : NP_082994.1

name	Asb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85060518 GeneID:65247 MGI:1929735
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_process : GO:0007275 - development [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0030539 - male genitalia development [Evidence IMP] codon_start : 1 note : isoform a is encoded by transcript variant 1; ankyrin repeat-containing SOCS box protein 1 product : ankyrin repeat and SOCS box-containing protein 1 isoform a protein_id : NP_001034215.1

name	Asb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85060520 GeneID:65247 MGI:1929735
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_process : GO:0007275 - development [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0030539 - male genitalia development [Evidence IMP] codon_start : 1 note : isoform b is encoded by transcript variant 2; ankyrin repeat-containing SOCS box protein 1 product : ankyrin repeat and SOCS box-containing protein 1 isoform b protein_id : NP_075533.3

name	Twist2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681177 CCDS:CCDS15166.1 GeneID:13345 MGI:104685
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IPI] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0045668 - negative regulation of osteoblast differentiation [Evidence ISS]; GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : dermis expressed 1 product : twist homolog 2 protein_id : NP_031881.1

name	Hdac4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402201 GeneID:208727 MGI:3036234
definition	GO_component : GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0016564 - transcriptional repressor activity [Evidence IDA] [Evidence IMP] GO_process : GO:0008285 - negative regulation of cell proliferation [Evidence IMP] [Evidence IDA]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IMP] [Evidence IDA]; GO:0001501 - skeletal development [Evidence IMP] codon_start : 1 product : histone deacetylase 4 protein_id : NP_997108.1

name	Ndufa10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13195624 CCDS:CCDS15167.1 GeneID:67273 MGI:1914523
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0003954 - NADH dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA] GO_process : GO:0006139 - nucleobase, nucleoside, nucleotide and nucleic acid metabolism [Evidence IEA] codon_start : 1 product : NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10 protein_id : NP_077159.1

name	Olfr1416 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22128869 CCDS:CCDS15168.1 GeneID:259040 MGI:3031250
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2R7CC-81277975-81278913; olfactory receptor MOR103-3 product : olfactory receptor 1416 protein_id : NP_667249.1

name	Olfr1415 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58372124 CCDS:CCDS15169.1 GeneID:258228 MGI:3031249
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2R7CC-81266841-81267776; olfactory receptor MOR103-12 product : olfactory receptor 1415 protein_id : NP_001011525.1

name	Olfr1414 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22128871 CCDS:CCDS15170.1 GeneID:259041 MGI:3031248
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2R7CC-81245243-81246181; olfactory receptor MOR103-2 product : olfactory receptor 1414 protein_id : NP_667250.1

name	Olfr1413 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22128875 CCDS:CCDS15171.1 GeneID:259039 MGI:3031247
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2R7CC-81180849-81179878; olfactory receptor MOR208-1 product : olfactory receptor 1413 protein_id : NP_667248.1

name	Olfr1412 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129729 CCDS:CCDS15172.1 GeneID:258274 MGI:3031246
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2R7CC-81165686-81164721; olfactory receptor MOR208-4 product : olfactory receptor 1412 protein_id : NP_666389.1

name	Olfr1411 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239104 CCDS:CCDS15173.1 GeneID:258483 MGI:3031245
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2R7CC-81157497-81156526; olfactory receptor MOR208-3 product : olfactory receptor 1411 protein_id : NP_666701.1

name	Olfr1410 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239102 GeneID:258484 MGI:3031244
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2R7CC-81146179-81145211; olfactory receptor MOR208-2 product : olfactory receptor 1410 protein_id : NP_666702.1

name	Olfr12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46047464 CCDS:CCDS15174.1 GeneID:257890 MGI:107863
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2R7CC-81134096-81133095 product : olfactory receptor 12 protein_id : NP_996779.1

name	Myeov2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82881000 GeneID:66915 MGI:1914165
definition	codon_start : 1 product : hypothetical protein LOC66915 protein_id : XP_893804.1

name	Otos (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346551 GeneID:260301 MGI:2672814
definition	GO_process : GO:0007605 - sensory perception of sound [Evidence IMP] codon_start : 1 note : organ of Corti 10 kDa protein product : otospiralin protein_id : NP_694754.1

name	Gpc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710028 CCDS:CCDS15177.1 GeneID:14733 MGI:1194891
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0048503 - GPI anchor binding [Evidence IEA] codon_start : 1 product : glypican 1 protein_id : NP_057905.1

name	Ankmy1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370284 CCDS:CCDS15178.1 GeneID:241158 MGI:3045261
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : ankyrin repeat and MYND domain containing 1 protein_id : NP_766438.1

name	Dusp28 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29171320 CCDS:CCDS15179.1 GeneID:67446 MGI:1914696
definition	GO_function : GO:0008138 - protein tyrosine/serine/threonine phosphatase activity [Evidence IEA] GO_process : GO:0006470 - protein amino acid dephosphorylation [Evidence IEA] codon_start : 1 product : dual specificity phosphatase 28 protein_id : NP_780327.1

name	LOC100040511 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234196 GeneID:100040511
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474890.1

name	Rnpepl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31088904 CCDS:CCDS15180.1 GeneID:108657 MGI:1914170
definition	GO_function : GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0004179 - membrane alanyl aminopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : arginyl aminopeptidase (aminopeptidase B)-like 1 protein_id : NP_852070.1

name	Capn10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87080823 CCDS:CCDS15181.1 GeneID:23830 MGI:1344392
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0004198 - calpain activity [Evidence IEA]; GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : calpain 8 product : calpain 10 protein_id : NP_035926.2

name	Gpr35 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560294 CCDS:CCDS15182.1 GeneID:64095 MGI:1929509
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : G-protein coupled receptor; internal gene name of KIRIN laboratory:M20 product : G protein-coupled receptor 35 protein_id : NP_071715.2

name	Aqp12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29243944 CCDS:CCDS15183.1 GeneID:208760 MGI:2664636
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0015288 - porin activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : aquaporin 12 protein_id : NP_808255.1

name	Kif1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680558 GeneID:16560 MGI:108391
definition	GO_component : GO:0005871 - kinesin complex [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA]; GO:0005875 - microtubule associated complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0007017 - microtubule-based process [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : kinesin heavy chain member 1A; N-3 kinesin product : kinesin family member 1A protein_id : NP_032466.1

name	Agxt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111038130 CCDS:CCDS15184.1 GeneID:11611 MGI:1329033
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0008453 - alanine-glyoxylate transaminase activity [Evidence IEA]; GO:0004760 - serine-pyruvate transaminase activity [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : alanine-glyoxylate aminotransferase 1 product : alanine-glyoxylate aminotransferase protein_id : NP_057911.2

name	2310007B03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:59709443 CCDS:CCDS15185.1 GeneID:71874 MGI:1919124
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC71874 protein_id : NP_765999.2

name	E030010N08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149234198 GeneID:381284 MGI:3045962
definition	codon_start : 1 product : similar to ciliary rootlet coiled-coil, rootletin protein_id : XP_001474905.1

name	Sned1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254325 GeneID:208777 MGI:3045960
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0007160 - cell-matrix adhesion [Evidence IEA] codon_start : 1 exception : mismatches in translation function : extracellular matrix component note : secreted protein SST3 product : secreted nidogen domain protein protein_id : NP_766051.3

name	Mterfd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30017341 GeneID:69821 MGI:1918355
definition	codon_start : 1 product : MTERF domain containing 2 protein_id : NP_835152.1

name	Pask (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18497292 CCDS:CCDS15186.1 GeneID:269224 MGI:2155936
definition	GO_component : GO:0005622 - intracellular [Evidence ISS] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation function : putative sensor protein note : paskin product : PAS domain containing serine/threonine kinase protein_id : NP_543126.1

name	LOC100040419 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040419
definition	number : 1 pseudo : _no_value

name	LOC100040419 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040419
definition	number : 2 pseudo : _no_value

name	LOC100040419 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040419
definition	number : 3 pseudo : _no_value

name	LOC665883 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665883
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:164122
definition	standard_name : AI326893

name	(CDS detail)
type	STS
link
xref	UniSTS:270459
definition	standard_name : PMC124275P1

name	(CDS detail)
type	STS
link
xref	UniSTS:158830
definition	standard_name : AU041749

name	(CDS detail)
type	STS
link
xref	UniSTS:178440
definition	standard_name : AI851378

name	(CDS detail)
type	STS
link
xref	UniSTS:178434
definition	standard_name : AI426616

name	(CDS detail)
type	STS
link
xref	UniSTS:161241
definition	standard_name : RH124419

name	(CDS detail)
type	STS
link
xref	UniSTS:125733
definition	standard_name : U36384

name	(CDS detail)
type	STS
link
xref	UniSTS:128942
definition	standard_name : D1Mit84

name	(CDS detail)
type	STS
link
xref	UniSTS:234175
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234174
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234176
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128724
definition	standard_name : D1Mit365

name	(CDS detail)
type	STS
link
xref	UniSTS:124327
definition	standard_name : 39.MMHAP59FRE12.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:489501
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:492963
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:491768
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:485063
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:492935
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:485105
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:491961
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:125100
definition	standard_name : MHAa27a6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:498343
definition	standard_name : Gpc1

name	(CDS detail)
type	STS
link
xref	UniSTS:498431
definition	standard_name : Gpc1

name	(CDS detail)
type	STS
link
xref	UniSTS:466038
definition	standard_name : Gpc1

name	(CDS detail)
type	STS
link
xref	UniSTS:207191
definition	standard_name : AW555635

name	(CDS detail)
type	STS
link
xref	UniSTS:123433
definition	standard_name : 19.MMHAP66FLG1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:158835
definition	standard_name : AI462976

name	(CDS detail)
type	STS
link
xref	UniSTS:128731
definition	standard_name : D1Mit371.1

name	(CDS detail)
type	STS
link
xref	UniSTS:491841
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:178437
definition	standard_name : AV005521

name	(CDS detail)
type	STS
link
xref	UniSTS:165091
definition	standard_name : AI894167

name	(CDS detail)
type	STS
link
xref	UniSTS:158834
definition	standard_name : AI430010

name	(CDS detail)
type	STS
link
xref	UniSTS:178441
definition	standard_name : AW049679

name	(CDS detail)
type	STS
link
xref	UniSTS:128820
definition	standard_name : D1Mit45

name	(CDS detail)
type	STS
link
xref	UniSTS:124822
definition	standard_name : D29951

name	(CDS detail)
type	STS
link
xref	UniSTS:163258
definition	standard_name : D29951

name	(CDS detail)
type	STS
link
xref	UniSTS:224090
definition	standard_name : Agxt

name	(CDS detail)
type	STS
link
xref	UniSTS:124732
definition	standard_name : D17849

name	(CDS detail)
type	STS
link
xref	UniSTS:94223
definition	standard_name : G42365

name	(CDS detail)
type	STS
link
xref	UniSTS:163078
definition	standard_name : RH126370

name	(CDS detail)
type	STS
link
xref	UniSTS:123372
definition	standard_name : 18.MMHAP23FLF3.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:209949
definition	standard_name : RH135953

name	(CDS detail)
type	STS
link
xref	UniSTS:178438
definition	standard_name : AI642697

name	(CDS detail)
type	STS
link
xref	UniSTS:271769
definition	standard_name : PMC193927P1

name	(CDS detail)
type	STS
link
xref	UniSTS:124152
definition	standard_name : 35.MMHAP65FRD11.seq

name	LOC665966 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234199 GeneID:665966
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 2 Proteins product : similar to hCG1641837 pseudo : _no_value transcript_id : XR_031959.1

clone name	MSMg01-298E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494K02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-174K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343B01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-299N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308L8
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455H14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-469A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130P15
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-440O14.T7 (MSMg01no440_o14.b1)	MSMg01-440O14.TJ (MSMg01no440_o14.g1)
ACC	AG530916	AG530917
length	773	743
length of high quality (start - end)	338 (76 - 413)	561 (83 - 643)
definition	CHROMAT_FILE: MSMg01no440_o14.b1 PHD_FILE: MSMg01no440_o14.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:07:31 2005	CHROMAT_FILE: MSMg01no440_o14.g1 PHD_FILE: MSMg01no440_o14.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:07:31 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TACCTCTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXCGCGGAATTCAGTANATATACCGGCGTTGCAGTCCAGTTGGCAAGCTT CCTCCCCCGACTGCATGGACGGCAGCAGGCTTCTCTGTCATTTCTACAGC CACCGGTTGAATATGTTGTTTTGGCTGAGATATGAAAAAAAAAAAACCCA AGACAGATCTTTTGGAGGGAAATTTTTCATAATTTTCTCCATAAAATGGT GGTATTACTCTTTGACAACACAGCAAATTTTGCTTTGTGTTTTCTTCTCT TCTCCTCCTTTCCTTTTTGTTTTTCTTGTGTTTAAGAATAAATATCATGA GATCTACTCTCCGGCAGACTGTGCCTGTGCCCTTGTGTGGTGTGTGTATG GTGTGTGTGTCTGNNANNNNNNCCCCCCCCCCTTTTCTTCTCTCTTTCCT CTTTTCTCTTTTCTTTCTTCTTCCTCTTTCTTTTTTTTCCCTTCTTTCTT CCTCCCGCTTTTTTTCTTTTTTCCTTGCTTCCTTTCTCTTTCCTTCTTTT TTTACTGTTCCTTCCCTCTGCTCTCTGTTTGTTTTCCCTTTTTTCTTCTC TCTCCTCTTCTTTTCTTTTTTTTATTGTTTGCGGACTATCTTTTTCTTTT CTCTTCACCATATTTTCTAATTCTTCAATCCTTTTATTTCTTCTCTTTCT CTTTCTTTCTAATTTATCTTATTCTTTATTTCTTTTTTCCCTTTCTTAAT TTTTATAATATCACATTCTTCAT	NNNNNCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATTACAGATGGTTCTGA GCCACCGTGTGGGTGCTAGGAATTGAACTCAGAACCTCTGAAAGAGCAGT CAGTGCTCTTAACTACTGAGCCATCTCTCCAGCCCTAAAAATGAACCTGT TGCTCTTTTTTTTTTAAAGATTTATTTATTTATTTATTTATTTATTTATT CATAACCTCTTTTAAATGCTTTAGATCTATTATTTCAATAGCACACCATC TTATCGCATCATAATGTTGTTTCACCTGGTTAGCAGGCATATTCCGTGTG ACCACTGGGAAAACTGCTGGTGGTGATTTCCTAATCCTTGGCCACCCCTC CTTCTACTCTGGTGGCGTGGTTGGTTCAGAATTTATCTTTTCTCTTAAAA TGAGCTGTTTGATGAGATTGTTCTCCCACTCTTTCAGCTTTTCTCTGACA GGACGACCCTCCAGCATGGTTTGTTTCCCTCTTTCTTCCTGTGGGAAACT CCTGCTCTCCTACTCAGTCACCAGGACTGAGTCCTTGTCCTCTCTTTTCC AGTGCTCCTTGCCTCCCAAGCACTTCCACTTCCTCCCACAGTTTTTCCAG TGGCACAGCTAACTCTGCAACCACTTAAGAAAAGAGAGCAGAGGGAACCC TTTTTGTTTCCCATTTCAGCCAACCTTTTTGTTTGTTTCCGGG
quality values	Open. Hide. 8 8 8 11 10 9 9 9 10 10 10 14 13 17 17 22 26 30 21 17 10 10 9 14 23 33 30 33 33 33 39 39 22 21 14 14 14 17 18 11 12 15 9 9 9 11 11 11 11 11 19 22 27 26 30 37 29 26 23 28 28 22 16 13 21 3 0 3 7 7 7 8 11 17 12 15 15 28 28 39 37 40 48 48 47 47 47 47 42 38 47 53 53 53 53 48 44 50 50 42 41 39 23 20 21 21 20 23 33 33 33 31 30 27 25 24 23 32 37 37 39 41 42 47 47 48 50 48 48 57 57 57 57 57 57 57 50 50 50 50 53 53 53 50 48 48 39 39 39 48 48 68 68 53 53 68 68 68 42 42 43 43 43 48 50 50 57 57 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 57 59 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 54 59 59 68 68 68 59 59 43 32 20 18 18 28 24 24 11 18 27 44 57 68 68 59 59 59 59 68 68 59 59 57 57 57 57 57 57 57 57 57 59 59 59 68 68 59 59 54 54 54 59 59 68 68 68 68 68 59 59 59 59 59 57 57 57 57 57 57 59 59 59 48 48 48 59 59 59 59 59 59 59 48 48 59 59 59 48 47 29 23 11 11 12 18 3 0 0 3 0 0 0 0 0 0 3 12 17 18 12 10 8 9 9 9 9 10 10 9 8 10 11 10 8 6 6 10 10 10 9 9 9 10 12 12 12 9 9 9 9 9 9 11 12 11 11 10 10 10 10 8 10 8 11 8 8 8 8 8 8 8 8 8 8 8 9 9 9 13 13 13 10 10 8 12 8 9 9 13 9 11 11 10 10 10 8 8 8 6 6 6 6 8 8 8 8 9 9 9 9 10 15 14 8 8 8 8 8 6 7 11 10 10 8 7 6 8 8 8 8 6 6 8 8 8 8 8 10 7 7 8 8 14 18 20 13 8 8 6 6 8 8 8 10 13 16 13 13 9 6 6 6 6 6 6 8 8 12 13 10 10 10 6 6 6 11 7 8 8 8 8 8 8 10 10 10 9 10 13 11 10 10 13 10 12 10 10 10 8 8 8 7 7 8 8 12 10 10 11 11 12 12 17 19 17 13 14 14 10 10 8 10 10 10 10 10 10 10 12 9 9 9 15 15 10 10 8 8 8 8 8 8 8 10 12 15 12 12 9 9 8 8 8 8 10 10 9 10 10 10 8 9 8 8 8 8 8 8 8 8 8 8 9 9 9 8 8 8 8 8 13 10 10 10 15 12 10 10 10 15 13 8 8 8 8 8 13 13 8 8 6 6 8 8 10 10 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 9 10 11 11 13 17 11 11 11 12 8 8 7 7 6 8 9 9 12 8 8 10 8 8 8 9 9 8 8 8 8 8 8 9 10 15 13 10 13 11 11	Open. Hide. 0 0 0 0 0 3 6 6 7 10 15 11 9 10 10 9 17 27 16 16 12 15 14 23 19 10 13 10 19 21 32 32 29 29 32 27 24 21 12 6 6 6 6 10 8 12 11 13 13 26 21 34 30 29 21 21 11 11 11 24 25 41 47 47 44 27 27 9 9 9 10 12 10 15 15 22 19 24 22 29 31 31 33 36 36 38 36 36 36 37 42 57 59 59 59 59 59 59 59 57 48 48 42 42 42 42 48 68 68 68 68 68 68 68 68 68 68 68 68 50 50 43 43 46 50 57 57 57 57 57 41 41 47 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 68 68 68 68 68 68 62 62 62 62 62 62 62 62 68 68 68 68 68 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 52 43 43 35 39 35 43 43 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 57 68 68 68 68 59 59 59 59 68 59 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 52 59 48 48 44 59 44 48 48 59 59 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 59 57 57 57 57 57 57 54 54 54 57 57 57 59 68 68 68 68 68 68 68 68 54 54 54 54 54 54 59 59 59 59 59 59 59 57 57 48 48 48 57 57 48 48 48 59 59 59 59 48 41 41 41 41 44 59 44 41 41 44 41 43 41 47 47 59 59 59 48 48 57 59 59 59 59 59 59 59 59 59 43 43 43 43 43 43 44 43 48 48 59 59 59 48 48 48 59 59 57 48 48 48 48 39 41 47 41 41 41 41 36 37 38 41 41 41 46 46 40 43 41 43 43 43 39 39 35 35 35 47 47 47 41 41 37 37 43 43 47 34 34 21 20 20 28 28 29 29 25 25 14 14 14 30 26 37 32 23 23 22 23 23 32 34 41 34 32 35 35 35 37 37 37 37 29 30 22 28 16 18 12 16 21 25 25 27 25 16 22 12 12 12 19 25 23 28 24 23 23 28 25 17 34 23 28 28 24 24 25 26 28 18 16 12 16 16 16 10 10 8 13 15 8 8 9 11 11 16 16 12 9 8 8 8 9 9 9 9 9 12 12 9 17 19 10 8 8 11 12 14 20 13 19 11 11 12 9 8 6 8 6 6 6 6 10 12 19 14 14 16 9 10 9 9 7 7 7 8 9 11 11 13 13

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no440_o14.b1 MSMg01no440_o14.b1 CHROMAT_FILE:
MSMg01no440_o14.b1 PHD_FILE: MSMg01no440_o14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:31 2005
         (338 letters)



>mm_chr1_94234115_94234852
          Length = 738

 Score =  615 bits (318), Expect = e-180
 Identities = 335/342 (97%), Gaps = 4/342 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcgttgcagtccagttggcaagcttcctcccccgactgcatggacggcagcaggcttctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gcgttgcagtccagttggcaagcttcctcccccgactgcatggacggcagcaggcttctc 256

                                                                       
Query: 61  tgtcatttctacagccaccggttgaatatgttgttttggctgagatatg---aaaaaaaa 117
           |||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||
Sbjct: 257 tgtcatttctacagccaccggttgaatatgttgttttggctgagatatgaaaaaaaaaaa 316

                                                                       
Query: 118 aaaacccaagacagatcttttggagggaaatttttcataattttctccataaaatggt-g 176
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 317 aaaacccaagacagatcttttggagggaaatttttcataattttctccataaaatggtgg 376

                                                                       
Query: 177 gtattactctttgacaacacagcaaattttgctttgtgttttcttctcttctcctccttt 236
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 377 gtattactctttgacaacacagaaaattttgctttgtgttttcttctcttctcctccttt 436

                                                                       
Query: 237 cctttttgtttttcttgtgtttaagaataaatatcatgagatctactctccggcagactg 296
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cctttttgtttttcttgtggttaagaataaatatcatgagatctactctccggcagactg 496

                                                     
Query: 297 tgcctgtgcccttgtgtggtgtgtgtatggtgtgtgtgtctg 338
           |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 497 tgcctgtgcccttgtgtggtatgtgtatggtgtgtgtgtctg 538


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space:   239841
Effective search space used:   239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information