TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTATCATATCCTCAAAGAAGACCTAATTCCAGTTCTTCTTAAACTATT
CTACAAAATAGAAACAGAAGGTACTCTACCCAATTCATTTTATGAAGCCA
AAATTACTCTGATACCTAAACCACATAAAGACCCAAAAAAGATAGAGAAA
TTCAGACTAATTTCCCTTATGAATATCTATGCAAACATACTCAATAAAAT
CCTCGCAAACAGAATCCACCAACACATCAAAATGATCATCCATCATGACC
AAGTAGGCTTCATCCCAGGGATGCAGGGATGGTTTAATATACAGAAACCC
ATCAACATAATCCACTACATAAACAAACTCAAAGACAAAAACCACATGAT
CATCTCCTTAGATGCAGAGAAAGCATTTGACAAAATTCAACACACATTCA
TGATAAAAGTCTTAGAAAGATCAGGAATTCAAGGCCCATACCTAAACATG
ATAAAAGCAATCTACAGCAAACCAGTAGCCAACATCAAAGTAAATGGAGA
GAAGCTGGACACAATCTCACTAAAATCAGGGACCAGACAAGGCTGCCCAC
TTTCTCCCTACCTATTCAATATAGTACTTGAAGTCCTAGCCAGAGCAATT
CAACAACAAAAGGGTGTCAAGGGGATACAAATTGGAAAGGAAGAAGTCAA
AATATCCCTGTTTGCTGATGATATGATAGTATATATAAGTGACCCTAAAA
ATTCCTTAAAATTCCGAGN

AATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAGGGTGGCGTTGATTGATGACATTGC
AGTGTATAGCCAGACATGGGAAGACCACGCTGAGCATGTAAAACAAGAAT
TGGGGTAGCTTTTACAAACAAGCTTGACAGTGTGGCCATGACATGTCAGC
CTGGCATGCTGAGGTGACATATTTAGGACACAGACAGGAGAAGCGGGCAG
CCAACACTCTGCTATGGTGGCCTTCTCTGTTTCTCAATAGACCATTTCAT
GAGGAAATGTTAGACAAAGATTACTGAACGTTGCTAACCAATTGCTCCAG
ATCAGTCATTGTTCTGTTTACAGATCACTTTACTGAGCCATGAAGACCAC
CCAGGATGGTGACAGGGCAGAAACAATTGGGTAGCTTGCCCCTAATTTTA
AATTTTAAAAGGTGTTCCTCTGAAGAGTTACAGAATTGAAACAAAAATAG
TTCATAAGTTTGTTATCCTCCATCCAGATGTTCATAATTGCTAATTACTT
ACGGTCTGTATTTCAGTCTCCAATAANGAGAAGTAGAGGTTACATTTAAN
ACAAGTATTTTTGGCACCTTGGAGTACTACGGGGCAGATCTACTTTCTCC
TATGCCTTTCTGAGCAAGAACGAAAGGGGTTTTTTTTTTCTTGGAAAGCC
CACCTTAAAAACCCTAAAGGGGGCCGCCAAACCATCCCCCCCAAAAAAAT
CCCCCCGTCTCATGAAAATAACCCCCTTTCCTTAAAATTTCCTT

Query= MSMg01no441_b19.g1 MSMg01no441_b19.g1 CHROMAT_FILE:
MSMg01no441_b19.g1 PHD_FILE: MSMg01no441_b19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:47 2005
         (494 letters)



>mm_chr1_170662872_170663765
          Length = 894

 Score =  955 bits (494), Expect = 0.0
 Identities = 494/494 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   agggtggcgttgattgatgacattgcagtgtatagccagacatgggaagaccacgctgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 agggtggcgttgattgatgacattgcagtgtatagccagacatgggaagaccacgctgag 635

                                                                       
Query: 61  catgtaaaacaagaattggggtagcttttacaaacaagcttgacagtgtggccatgacat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 catgtaaaacaagaattggggtagcttttacaaacaagcttgacagtgtggccatgacat 575

                                                                       
Query: 121 gtcagcctggcatgctgaggtgacatatttaggacacagacaggagaagcgggcagccaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gtcagcctggcatgctgaggtgacatatttaggacacagacaggagaagcgggcagccaa 515

                                                                       
Query: 181 cactctgctatggtggccttctctgtttctcaatagaccatttcatgaggaaatgttaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 cactctgctatggtggccttctctgtttctcaatagaccatttcatgaggaaatgttaga 455

                                                                       
Query: 241 caaagattactgaacgttgctaaccaattgctccagatcagtcattgttctgtttacaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 caaagattactgaacgttgctaaccaattgctccagatcagtcattgttctgtttacaga 395

                                                                       
Query: 301 tcactttactgagccatgaagaccacccaggatggtgacagggcagaaacaattgggtag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tcactttactgagccatgaagaccacccaggatggtgacagggcagaaacaattgggtag 335

                                                                       
Query: 361 cttgcccctaattttaaattttaaaaggtgttcctctgaagagttacagaattgaaacaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cttgcccctaattttaaattttaaaaggtgttcctctgaagagttacagaattgaaacaa 275

                                                                       
Query: 421 aaatagttcataagtttgttatcctccatccagatgttcataattgctaattacttacgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaatagttcataagtttgttatcctccatccagatgttcataattgctaattacttacgg 215

                         
Query: 481 tctgtatttcagtc 494
           ||||||||||||||
Sbjct: 214 tctgtatttcagtc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space:   427856
Effective search space used:   427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)