Query= MSMg01no442_e06.b1 MSMg01no442_e06.b1 CHROMAT_FILE:
MSMg01no442_e06.b1 PHD_FILE: MSMg01no442_e06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:21 2005
(245 letters)
>mm_chr1_73209776_73210422
Length = 647
Score = 443 bits (229), Expect = e-129
Identities = 242/247 (97%), Gaps = 2/247 (0%)
Strand = Plus / Plus
Query: 1 agagtcttcctaataaaaccaattccagaaatgtgtgccagctgtgagccaaaaccttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagtcttcctaataaaaccaattccagaaatgtgtgccagctgtgagccaaaaccttca 260
Query: 61 cctggttctctcatcattctccagtaactgggaaattggatgccacgatcctcttataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctggttctctcatcattctccagtaactgggaaattggatgccacgatcctcttataaa 320
Query: 121 aaaat--tgaaagaatcttaataccatgtcaagtaatcggattgcactgccaggtgacca 178
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 aaaaaaatgaaagaatcttaataccatgtcaagtaatcagattgcactgccaggtgacca 380
Query: 179 gaccataagtccccagcatgatcaatatcatggtttctcattgtactattgtttccttaa 238
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 gaccataagtccccagcatgatcaataccatggtttctcattgtactattgtttccttaa 440
Query: 239 cttgccc 245
|||||||
Sbjct: 441 cttgccc 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 647
Length adjustment: 9
Effective length of query: 236
Effective length of database: 638
Effective search space: 150568
Effective search space used: 150568
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no442_e06.g1 MSMg01no442_e06.g1 CHROMAT_FILE:
MSMg01no442_e06.g1 PHD_FILE: MSMg01no442_e06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:21 2005
(238 letters)
>mm_chr1_73363398_73364035
Length = 638
Score = 449 bits (232), Expect = e-131
Identities = 235/236 (99%)
Strand = Plus / Minus
Query: 1 ctgatatcaggaatgaagagaaggtgtcacaggaaagaaatggacaagcagaaatttaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctgatatcaggaatgaagagaaggtgtcacaggaaagaaatggacaagcagaaatttaca 377
Query: 61 gaaaaaagtcaggcaaatacacttaaattaaaaatctagaaagactcattcaaaaattac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaaaaaagtcaggcaaatacacttaaattaaaaatctagaaagactcattcaaaaattac 317
Query: 121 aaaactggattatgttatggggattgacaaaaagtgaattagaaagatctaattgtctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 316 aaaactggattatgttatggggattgacaaaaagtgaattagaaagatctaattgtccct 257
Query: 181 cccactatctattaaaatgctaattcatcatcagactccctccccaaaagacaacg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 cccactatctattaaaatgctaattcatcatcagactccctccccaaaagacaacg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
