Query= MSMg01no443_d02.b1 MSMg01no443_d02.b1 CHROMAT_FILE:
MSMg01no443_d02.b1 PHD_FILE: MSMg01no443_d02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:43 2005
(131 letters)
>mm_chr1_67192831_67193361
Length = 531
Score = 201 bits (104), Expect = 1e-56
Identities = 125/136 (91%), Gaps = 10/136 (7%)
Strand = Plus / Minus
Query: 1 tatactagcgaattccatggtttccttttt----t-ttgcccaaaatttggtgagaaaac 55
|||||||||||||||||||||||||||||| | || ||||||||||||||||||
Sbjct: 331 tatactagcgaattccatggtttcctttttaatgtatt----aaaatttggtgagaaaac 276
Query: 56 ttagttgcctttggggaaatttttgaattactagtgaggaagtgtttctttctggtctgg 115
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 275 ttagttgcctttggggaaatttttgaa-cactagtgaggaagtgtttctttctggtctgg 217
Query: 116 gttatgaagacgcatg 131
||||||||||||||||
Sbjct: 216 gttatgaagacgcatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 131
Length of database: 531
Length adjustment: 8
Effective length of query: 123
Effective length of database: 523
Effective search space: 64329
Effective search space used: 64329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no443_d02.g1 MSMg01no443_d02.g1 CHROMAT_FILE:
MSMg01no443_d02.g1 PHD_FILE: MSMg01no443_d02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:43 2005
(149 letters)
>mm_chr1_67052708_67053256
Length = 549
Score = 253 bits (131), Expect = 3e-72
Identities = 143/147 (97%)
Strand = Plus / Plus
Query: 1 atcccctttataagtagatactattccatggcatgtgcacaccatagcccacctatatat 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 atcccctttataagtagatactattccatggcatgtgcacaccatagtttacctatatat 260
Query: 61 tcatctgttgatggatagcagatgctcagatactttttcacatttgacttcaagcagagc 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 tcatctgttgatggatagcagatgctcagatactttttcacatttggcttcaagcagagc 320
Query: 121 tgttatggatagtcattgggggggggg 147
|||||||||||||||||||||||||||
Sbjct: 321 tgttatggatagtcattgggggggggg 347
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 149
Length of database: 549
Length adjustment: 8
Effective length of query: 141
Effective length of database: 541
Effective search space: 76281
Effective search space used: 76281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
