Query= MSMg01no444_g10.b1 MSMg01no444_g10.b1 CHROMAT_FILE:
MSMg01no444_g10.b1 PHD_FILE: MSMg01no444_g10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:17 2005
(386 letters)
>mm_chr1_64869361_64870146
Length = 786
Score = 553 bits (286), Expect = e-162
Identities = 325/342 (95%), Gaps = 10/342 (2%)
Strand = Plus / Minus
Query: 1 ggtgataagtaatgaaaatggcttcaaaactgtctaatgcatatgtttagcagattaaag 60
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 337 ggtgataagtaatgaaaatggcttcaaaaccgtctaatgcgtatgtttagcagattaaag 278
Query: 61 gagaaagatgggcttctgggattaaagctcaggttattttgtagattaagagagagtgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gagaaagatgggcttctgggattaaagctcaggttattttgtagattaagagagagtgct 218
Query: 121 aagaatctggagactctgccgggccgtgatggcgc-acgcctttaatcccagcactcggg 179
|||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 217 aagaatctggagactctgccgggcggtgatggc-caacgcctttaatcccagcactcggg 159
Query: 180 aggcagaggcaggcagatttctgagttccaggccagcctggtctacaaagtgagttccag 239
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 158 aggcagaggcaggcagatttctgagttcgaggccagcctggtctacaaagtgagttccag 99
Query: 240 gacagccagggct----attttgagaaatcctgtctcgaaaacaaacaaactaacaaaca 295
||||||||||||| | |||||| |||||||||||||||||||||||||||||||
Sbjct: 98 gacagccagggctacaca----gagaaaccctgtctcgaaaacaaacaaactaacaaaca 43
Query: 296 aagaatctggagactccactaaaaaaaactcagcatgaacct 337
|||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 42 aagaatctggagaccccacttaaaaaaactcagcatgaacct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 786
Length adjustment: 9
Effective length of query: 377
Effective length of database: 777
Effective search space: 292929
Effective search space used: 292929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no444_g10.g1 MSMg01no444_g10.g1 CHROMAT_FILE:
MSMg01no444_g10.g1 PHD_FILE: MSMg01no444_g10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:18 2005
(140 letters)
>mm_chr1_64737017_64737556
Length = 540
Score = 271 bits (140), Expect = 1e-77
Identities = 140/140 (100%)
Strand = Plus / Plus
Query: 1 gcgcggctcagcttaagggacggggcggggctttgtgagtcacgtgcctgggccgtaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcgcggctcagcttaagggacggggcggggctttgtgagtcacgtgcctgggccgtaggc 260
Query: 61 gggtgcgtggagggaagtccgggtctgattggctacccgtcaccaggtgaccgcggagcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggtgcgtggagggaagtccgggtctgattggctacccgtcaccaggtgaccgcggagcg 320
Query: 121 cgttccggttggcaggagcc 140
||||||||||||||||||||
Sbjct: 321 cgttccggttggcaggagcc 340
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 140
Length of database: 540
Length adjustment: 8
Effective length of query: 132
Effective length of database: 532
Effective search space: 70224
Effective search space used: 70224
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
