Query= MSMg01no447_l13.b1 MSMg01no447_l13.b1 CHROMAT_FILE:
MSMg01no447_l13.b1 PHD_FILE: MSMg01no447_l13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:42 2005
(500 letters)
>mm_chr1_67140276_67141175
Length = 900
Score = 955 bits (494), Expect = 0.0
Identities = 497/498 (99%), Gaps = 1/498 (0%)
Strand = Plus / Plus
Query: 4 ggaattctcctgtgtccactttctgggatcataaatatgtgccacaattcctggcctttg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcctgtgtccactttctgggatcataaatatgtgccacaattcctggcctttg 263
Query: 64 ttacctaggttttggagaggggtatgtgaaattcaggttttcatgcttagaagccacgtg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttacctaggttttggagaggggtatgtgaaattcaggttttcatgcttagaagccacgtg 323
Query: 124 cattcctggccgagtcatccctctgcccccaggactcatcttttttttttttattacata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cattcctggccgagtcatccctctgcccccaggactcatcttttttttttttattacata 383
Query: 184 ttttcctcaattacatttccaatgctatccccaaagtcccccataccctcccccccactt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttttcctcaattacatttccaatgctatccccaaagtcccccataccctcccccccactt 443
Query: 244 ccctacccacccattcccatttttttttttttggccctggcattcccctgtactggggca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ccctacccacccattcccatttttttttttttggccctggcattcccctgtactggggca 503
Query: 304 tataaagttttcatgaccaatgggcctctctttccactgatggccgactaggccatcttt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tataaagttttcatgaccaatgggcctctctttccactgatggccgactaggccatcttt 563
Query: 364 tgatacatatgcagctagagtcaggagctccgggggggggg-tactggttagttcataat 422
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 564 tgatacatatgcagctagagtcaggagctccgggggggggggtactggttagttcataat 623
Query: 423 gttgttccacctatagggttgcagttccctttagctccttgggtactttctctagctcct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gttgttccacctatagggttgcagttccctttagctccttgggtactttctctagctcct 683
Query: 483 ccattgggggccctgtga 500
||||||||||||||||||
Sbjct: 684 ccattgggggccctgtga 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_l13.g1 MSMg01no447_l13.g1 CHROMAT_FILE:
MSMg01no447_l13.g1 PHD_FILE: MSMg01no447_l13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:43 2005
(364 letters)
>mm_chr1_67256230_67256993
Length = 764
Score = 681 bits (352), Expect = 0.0
Identities = 361/364 (99%)
Strand = Plus / Minus
Query: 1 tgttctgttgcctttattaatccaatgaaaaggagaggagatagtgggaaacaagagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgttctgttgcctttattaatccaatgaaaaggagaggagatagtgggaaacaagagaag 505
Query: 61 aaaaatcagaggctcaattagaaatcttagaaagcaaagtgtttgggtgtttttataaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaaaatcagaggctcaattagaaatcttagaaagcaaagtgtttgggtgtttttataaca 445
Query: 121 ctcgctaaaacataaaaggaaagccacagacaaaggaaaatgagaacgaaagatctattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctcgctaaaacataaaaggaaagccacagacaaaggaaaatgagaacgaaagatctattc 385
Query: 181 aagaaggaggagtggggtttggtaattgatactgaacatcatcaaagagaaaggctgaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aagaaggaggagtggggtttggtaattgatactgaacatcatcaaagagaaaggctgaca 325
Query: 241 gtccgaaaggttaggaatacgatacccatgagaagtcaactcaatcttcagagactttga 300
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtccgaaaggcaaggaatacgatacccatgagaagtcaactcaatcttcagagactttga 265
Query: 301 gagttggccttcagggttttgtgttgtttttgtttgttttgttggttggtattagggaag 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 264 gagttggccttcagggttttgtgttgtttttgtttgttttgttggttgttattagggaag 205
Query: 361 cgga 364
||||
Sbjct: 204 cgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space: 268025
Effective search space used: 268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
