Query= MSMg01no448_h17.b1 MSMg01no448_h17.b1 CHROMAT_FILE:
MSMg01no448_h17.b1 PHD_FILE: MSMg01no448_h17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:46 2005
(468 letters)
>mm_chr1_97336948_97337815
Length = 868
Score = 878 bits (454), Expect = 0.0
Identities = 463/466 (99%), Gaps = 1/466 (0%)
Strand = Plus / Minus
Query: 4 gaattctattttt-atacctgagtatccattgtgtaaatgtaccacattttctgtatcca 62
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 gaattctatttttaatatctgagtatccattgtgtaaatgtaccacattttctgtatcca 777
Query: 63 ttcctctgttgaaggacatctgggttcttttcagatagactaatttttaattcccaccaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 ttcctctgttgaaggacatctgggttcttttcagatagactaatttttaattcccaccaa 717
Query: 123 tattcaagcaattagttcagtaaatgaatttgtgtggtatttggtggataaaaataaata 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 tattcaagcaattagttcagtaaatgaatttgtgtggtatttggtggataaaaataaata 657
Query: 183 ggtttaatattttcttaatagatttattcaaactgtctcagatatcttggtaaggttcca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ggtttaatattttcttaatagatttattcaaactgtctcagatatcttggtaaggttcca 597
Query: 243 acctatgtccccctactctctagctatcacatttgtaggcactatccagacatggttaat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 acctatgtccccctactctctagctatcacatttgtaggcactatccagacatggttaat 537
Query: 303 aggtctttttgtatttctcttaagttccgacttctaggaagcttcttaaaaaacttttta 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aggtctttttgtatttctcttaagttccgacttctaggaagcttcttaaaaaacttttta 477
Query: 363 aattcctcaagagtcttgtatgtctttccctcattaacgagtattatctgcaaactacct 422
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 aattcctcaggagtcttgtatgtctttccctcattaacgagtattatctgcaaactacct 417
Query: 423 taaatgcgtgctctatgttcaacatgtatcatgctgctatcactta 468
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 taaatgcgtgctctatgttcaacatgtatcatgctgctatcactta 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_h17.g1 MSMg01no448_h17.g1 CHROMAT_FILE:
MSMg01no448_h17.g1 PHD_FILE: MSMg01no448_h17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:46 2005
(391 letters)
>mm_chr1_97217081_97217871
Length = 791
Score = 741 bits (383), Expect = 0.0
Identities = 389/391 (99%)
Strand = Plus / Plus
Query: 1 tttttttctgcttttggttggttagtttatgttcttctgagacatggttgcatgtagccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttttttctgcttttggttggttagtttatgttcttctgagacatggttgcatgtagccc 260
Query: 61 aggctggcctcttaattcaatgtataactgagccaggctggacctcttattcctcctgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggctggcctcttaattcaatgtataactgagccaggctggacctcttattcctcctgac 320
Query: 121 tccacctttggagagttgagatataggcagccgtggaccactcaactcctcctgtgttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccacctttggagagttgagatataggcagccgtggaccactcaactcctcctgtgttga 380
Query: 181 taaccacttgtctgccaaggagagcaggtctttgattcctgaggtctcttttcagacaat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 381 taaccacttgtctgccaaggagagcaggtctttgattcctgaggtctcttttaagacatt 440
Query: 241 ggaatatgaatatttgcaaagggaatgtcctaaccactgttaatatatttcagtggcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaatatgaatatttgcaaagggaatgtcctaaccactgttaatatatttcagtggcatg 500
Query: 301 tgggcctttcccttaaccctttgttcagtctacatactactatgacccgttattagttac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgggcctttcccttaaccctttgttcagtctacatactactatgacccgttattagttac 560
Query: 361 ctttttctagaagaatttcaagtgacacctg 391
|||||||||||||||||||||||||||||||
Sbjct: 561 ctttttctagaagaatttcaagtgacacctg 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
