Query= MSMg01no449_a22.b1 MSMg01no449_a22.b1 CHROMAT_FILE:
MSMg01no449_a22.b1 PHD_FILE: MSMg01no449_a22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:33 2005
(384 letters)
>mm_chr1_96441594_96442377
Length = 784
Score = 719 bits (372), Expect = 0.0
Identities = 381/384 (99%)
Strand = Plus / Plus
Query: 1 acacaaaaatgatagttaattctaagcgaaaagtgcttttgctacagatgtaaccaagga 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 acacaaaaatgatagttaattctaagcggaaagtgcttttgctacagatgtaaccaagga 260
Query: 61 acactcaatacctatgagtcaccaagcagtaataagattgtcattgaatttcatctggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acactcaatacctatgagtcaccaagcagtaataagattgtcattgaatttcatctggga 320
Query: 121 aagagcagagcctgagtcacaaagtggcttttaagaggccagtaatgaagaaagataatg 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagagcagagcttgagtcacaaagtggcttttaagaggccagtaatgaagaaagataatg 380
Query: 181 ttcctgaatatctgtgcctattagggcagtttctaaagcttattaatggaagttttattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcctgaatatctgtgcctattagggcagtttctaaagcttattaatggaagttttattc 440
Query: 241 aaaatcatggaataatcagaaactctatttgaagttctctgtaatcctattaaaactaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaatcatggaataatcagaaactctatttgaagttctctgtaatcctattaaaactaat 500
Query: 301 gaccacataatctgcctgtaaaagtataggaactgtttgtatattcttctacctagtttt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 501 gaccacataatctgcctgtaaaagtataggaactgtttgtatattcttctacctaggttt 560
Query: 361 tcattctgtagttatttgtcaaac 384
||||||||||||||||||||||||
Sbjct: 561 tcattctgtagttatttgtcaaac 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_a22.g1 MSMg01no449_a22.g1 CHROMAT_FILE:
MSMg01no449_a22.g1 PHD_FILE: MSMg01no449_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:33 2005
(409 letters)
>mm_chr1_96608537_96609345
Length = 809
Score = 731 bits (378), Expect = 0.0
Identities = 404/418 (96%), Gaps = 9/418 (2%)
Strand = Plus / Minus
Query: 1 agaaaacactactctagatgtgatgcaaggaagtgaaattaaatattgtgtgaaaaacca 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 539 agaaaacactactctagatgtgatgcaaggaagtgaaattaaatattgtatgaaaaacca 480
Query: 61 taaatatgtactgaaaggcatttcacaaaacccacgtaaagtcagattggatattttatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 taaatatgtactgaaaggcatttcacaaaacccacgtaaagtcagattggatattttatg 420
Query: 121 gttttgttacattgcttataagcttgaaagaaggagaaacactttttgctattgtcatat 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gttttgttccattgcttataagcttgaaagaaggagaaacactttttgctattgtcatat 360
Query: 181 ctgataagtgtgggatttaatgttctcactatggccgtgttcttaataaaataaatccct 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ctgatgagtgtgggatttaatgttctcactatggccgtgttcttaataaaataaatccct 300
Query: 241 cttgaacttacagagttccttgtgcttaattgtcctacagaacaacacttgggcatcaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 cttgaacttacagagttccttgtgcttaattgtcctacagaacaacacttgggcatcaca 240
Query: 301 gtgattctactcagagtggttgatagaaatgatcca---------gcacttccacaatcg 351
|||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 239 gtgattctactcagagtggttgatagaaatgatccagcatcctctgcactttcacaatcg 180
Query: 352 ccatggaaacatcaagtatcggcagcagagctttggtatatgttttcagttactaatt 409
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ccatggaaacatcaagtataggcagcagagctttggtatatgttttcagttactaatt 122
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
