Query= MSMg01no449_f22.b1 MSMg01no449_f22.b1 CHROMAT_FILE:
MSMg01no449_f22.b1 PHD_FILE: MSMg01no449_f22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:58 2005
(594 letters)
>mm_chr1_83270387_83271382
Length = 996
Score = 1052 bits (544), Expect = 0.0
Identities = 582/596 (97%), Gaps = 6/596 (1%)
Strand = Plus / Minus
Query: 3 ggaattctggcatctttac--cgtgcttttccaggagattgtactgtaagcaggaataaa 60
||||||||||||||| || | ||||||||||||||||||||||||||||||||||||
Sbjct: 796 ggaattctggcatctagacatc--gcttttccaggagattgtactgtaagcaggaataaa 739
Query: 61 ctttgaattgtgggcaaggtaattctttccttcaggctgagaacatcagctcctttcata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ctttgaattgtgggcaaggtaattctttccttcaggctgagaacatcagctcctttcata 679
Query: 121 acttccactttctgcacactactcacaagagaccactgtactatccctttctttttagtc 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 678 acttccactttctgcacactactcataagagaccactgtactatccctttctttttagtc 619
Query: 181 cataatgaaaggtcagtaaaacagaaaac-aaaaaaaacaaagttcaagctttagaagca 239
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 618 cataatgaaaggtcagtaaaacagaaaacaaaaaaaaacaaagttcaagctttagaagca 559
Query: 240 tacagttcaagaaatgacctgcataatctttttagagatgtatgtctaccattcattatt 299
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 558 tacagttcaagaaatgacctgcataatctttttagagatgtatgtctgccattcattatt 499
Query: 300 tacaaaaaggccttagatttttttttatatttaaccggtatatataaagtgaacatagct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tacaaaaaggccttagatttttttttatatttaaccggtatatataaagtgaacatagct 439
Query: 360 attaataaatagttacagctctctaaaatctggagtacctttgccccgagcagaagagat 419
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 438 attaataaatagttacagctctctaaaatctggagtacatttgtcccgagcagaagagat 379
Query: 420 caaggtcctaaggcaccgcccacatggtgtagaaagtacagggtccagtcagagaggaga 479
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 378 caaggtcctaaggcaccgcccacatggtgtagaaagtatagggtccagtcagagaggaga 319
Query: 480 atttcctgttagacagtgctaagaactttcctttccaattggctaaaaccccagaagcac 539
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atttcctgttagaaagtgctaagaactttcctttccaattggctaaaaccccagaagcac 259
Query: 540 aaggagaagag-aaaaaaagaaacccaaagcacaaataacctttgactacttacag 594
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aaggagaagagaaaaaaaagaaacccaaagcacaaataacctttgactacttacag 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 996
Length adjustment: 10
Effective length of query: 584
Effective length of database: 986
Effective search space: 575824
Effective search space used: 575824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_f22.g1 MSMg01no449_f22.g1 CHROMAT_FILE:
MSMg01no449_f22.g1 PHD_FILE: MSMg01no449_f22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:59 2005
(251 letters)
>mm_chr1_83087026_83087676
Length = 651
Score = 478 bits (247), Expect = e-139
Identities = 250/251 (99%)
Strand = Plus / Plus
Query: 1 tgaaacttgagaccagactgctgaggttggtgagaaaaagctaagctggaggtaaagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaaacttgagaccagactgctgaggttggtgagaaaaagctaagctggaggtaaagcat 260
Query: 61 gagaaagaaccagtgattaaccggtataggaaataaggcaggagtaagccaatatattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagaaagaaccagtgattaaccggtataggaaataaggcaggagtaagccaatatattta 320
Query: 121 gatcatggtggagacttttgtgaacctcagcaaactccatttgaggtgctaagtagatat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 gatcatggtggagacttttgtgaacctcagcaaactccatttgaggtgctaaatagatat 380
Query: 181 ggatgttatggtgagggtgactatgtgctgtgagaaacaaagaccctgttcacagtaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggatgttatggtgagggtgactatgtgctgtgagaaacaaagaccctgttcacagtaaag 440
Query: 241 acccaaatctt 251
|||||||||||
Sbjct: 441 acccaaatctt 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
