NGGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTCAAATTACCAAACTCAAATGTCTGAGAAACACTTAAATGCT
TAACACCCTTAGCCAGCAGGGAAATGCAAATCAAAACATCTTTGAGATTT
CATCTTATACCAACCTGAATGGCTAAAAATCAGTAACAAAAGTGATAGCT
AATGCTAGTGAGGATGTGGAGTAAGGGGAACACTCACCTCCTGTTTGGAG
GAGTGCAAACTTGTGCAGCCACTGTGGAAGTCAGTGTGGCATGAGGAAGT
TGAGAATTGATTCAAAGACTTCTTAATCTTACCAGAGAGGAACTTGATCA
ACCATACTCATTGATCCTTTATTTATAACAGCCAGAAATTGTGTACCACT
TAGATGTCCCTTAACAAAAGAACGAATAAAGAAAATATGGTACATTTACA
CAATTGAGTATTACTTAGTCATTAAAAAAATCATACAATTGGCAGGAAAA
TGAATAGAACTAGAAAAAAATCATCCAGAGTGAGACAACTAAGATCCAGA
AAAACAAATATAGTATATATTCACTAATATGTGAATGTTAATGGTGAAGT
CATTGATAAGCAAGCTAAAATCCACTGAACCATAGAGGGTAGGTATATAT
AAAGGGACTAGAGTGGTCTGCTTTCCCTCTACACAGAGATTGAATAGTTA
CTTATGGAAGGATGTTGNAGAAACTGGAACAGGAAAGTGAAGTGCAAGTG
CCACA

NACGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTGGCACCCCTGTGCCACCTCTTTTT
AAGGATAGTAAAAAAAGCCTTTGAATATGAGTTCTTAAAAATTCTTTGAA
GTAGAACTAGGGACAATGAGCATTCACCTTTCCTACCCTTTGTTGTTAGA
AAGTATGGTAGACGTATTCAGAAGGTTGTGTTCATGAGTCAGGTGAACAC
CTGCCAGCCCTTCAGAAGTACCTCTTCCCCTACTGAGCATATGGTACTGA
AGCAGTGCTTTCTTCTGGTAAAAGCAAAACACACCTCATTCCCAGAGGAA
CTGGATCTATTGTGCAACCTGAGAGAAAACTCACAATGAACTATCTGTTC
TTTAAGTGATTCCTGACTGTCAGCTCTGCCCATGCTTCCTATTTATGTGA
GACAGTGGCATGTCCCTTGTTAAAATGCTATCAGTGTATACATCAGGATG
ACTCTGTATGTTTCAACCACTGAAGATGTATTTCAGGAAATAATTGGCTA
CCAGCAAAAAATGGGTGAAAGGATGCAAAGGATACGTTCTAAGTATCAGC
TCATTATTGACTGCAAAGTATCACTGAGAGCGAATAAATAATTAAATAAA
TAAATAAATAAATAAATAAATAAATAAATACTGCTTTATCGGGATTCTGC
CAAGGCATGAACCAAAAGCAAGAACTGTCACGAATATCATGAGACTAAGG
GCCTTTG

Query= MSMg01no450_b08.g1 MSMg01no450_b08.g1 CHROMAT_FILE:
MSMg01no450_b08.g1 PHD_FILE: MSMg01no450_b08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:53 2005
         (542 letters)



>mm_chr1_56459277_56460218
          Length = 942

 Score = 1040 bits (538), Expect = 0.0
 Identities = 541/542 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttggcacccctgtgccacctctttttaaggatagtaaaaaaagcctttgaatatgagttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttggcacccctgtgccacctctttttaaggatagtaaaaaaagcctttgaatatgagttc 260

                                                                       
Query: 61  ttaaaaattctttgaagtagaactagggacaatgagcattcacctttcctaccctttgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaaaattctttgaagtagaactagggacaatgagcattcacctttcctaccctttgtt 320

                                                                       
Query: 121 gttagaaagtatggtagacgtattcagaaggttgtgttcatgagtcaggtgaacacctgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttagaaagtatggtagacgtattcagaaggttgtgttcatgagtcaggtgaacacctgc 380

                                                                       
Query: 181 cagcccttcagaagtacctcttcccctactgagcatatggtactgaagcagtgctttctt 240
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagcccttcagaagtacttcttcccctactgagcatatggtactgaagcagtgctttctt 440

                                                                       
Query: 241 ctggtaaaagcaaaacacacctcattcccagaggaactggatctattgtgcaacctgaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctggtaaaagcaaaacacacctcattcccagaggaactggatctattgtgcaacctgaga 500

                                                                       
Query: 301 gaaaactcacaatgaactatctgttctttaagtgattcctgactgtcagctctgcccatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaaactcacaatgaactatctgttctttaagtgattcctgactgtcagctctgcccatg 560

                                                                       
Query: 361 cttcctatttatgtgagacagtggcatgtcccttgttaaaatgctatcagtgtatacatc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttcctatttatgtgagacagtggcatgtcccttgttaaaatgctatcagtgtatacatc 620

                                                                       
Query: 421 aggatgactctgtatgtttcaaccactgaagatgtatttcaggaaataattggctaccag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggatgactctgtatgtttcaaccactgaagatgtatttcaggaaataattggctaccag 680

                                                                       
Query: 481 caaaaaatgggtgaaaggatgcaaaggatacgttctaagtatcagctcattattgactgc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caaaaaatgggtgaaaggatgcaaaggatacgttctaagtatcagctcattattgactgc 740

             
Query: 541 aa 542
           ||
Sbjct: 741 aa 742


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space:   495824
Effective search space used:   495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)