Query= MSMg01no450_c24.b1 MSMg01no450_c24.b1 CHROMAT_FILE:
MSMg01no450_c24.b1 PHD_FILE: MSMg01no450_c24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:01 2005
(345 letters)
>mm_chr1_92553395_92554142
Length = 748
Score = 621 bits (321), Expect = 0.0
Identities = 338/345 (97%), Gaps = 3/345 (0%)
Strand = Plus / Minus
Query: 1 gagccatatctccagttccccttcatttctcaaacataccttcttggaggcacgttattg 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gagccacatctccagttccccttcatttctcaaacataccttcttggaggcacgttattg 486
Query: 61 gttcattccagtctgtcccagtgacttctctctagatgataatgatgagattctagatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gttcattccagtctgtcccagtgacttctctctagatgataatgatgagattctagatac 426
Query: 121 cacggaccttggacaaaaagggctacattggaaagccaaactttgaatagcaggaatcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cacggaccttggacaaaaagggctacattggaaagccaaactttgaatagcaggaatcct 366
Query: 181 ctgggaaaaaaaaaaa---aactcccagctgcatatgtaagccaaggttgtcgtcgggcc 237
|||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||
Sbjct: 365 ctgggaaaaaaaaaaaaacaactcccagctgcatatgtaagccaaggctgtcatcgggcc 306
Query: 238 tcagccgaccacgcttcctccagcagctgcccgtgtcagagaacatttgggcctcggctg 297
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 305 tcagccgaccacgcttcctccagcagctgtccgtgtcagagaacatttgggcctcggctg 246
Query: 298 accatatcccagccctgtactagttactcagtaagaccctcttgg 342
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 accatatcccagccctgtactagttactcagtaagaccctcttgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 748
Length adjustment: 9
Effective length of query: 336
Effective length of database: 739
Effective search space: 248304
Effective search space used: 248304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_c24.g1 MSMg01no450_c24.g1 CHROMAT_FILE:
MSMg01no450_c24.g1 PHD_FILE: MSMg01no450_c24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:01 2005
(495 letters)
>mm_chr1_92367851_92368744
Length = 894
Score = 878 bits (454), Expect = 0.0
Identities = 484/502 (96%), Gaps = 15/502 (2%)
Strand = Plus / Plus
Query: 1 tgtttaaggaaatttttatcacctcctgaaatggaacactggtgctgtttgccctcagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtttaaggaaatttttatcacctcctgaaatggaacactggtgctgtttgccctcagta 260
Query: 61 gaatcaggctataaaaataaattccatgtaaacagagcaacgctgttgaatcccacctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatcaggctataaaaataaattccatgtaaacagagcaacgctgttgaatcccacctct 320
Query: 121 atacatctgtgccctgtatctgagccgcctggacttggacgacccaagtgttacggatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atacatctgtgccctgtatctgagccgcctggacttggacgacccaagtgttacggatat 380
Query: 181 attcaagattgactacgagtaatagagaactctggctctttccagaagggttggaaaaga 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attcaagattgactatgagtaatagagaactctggctctttccagaagggttggaaaaga 440
Query: 241 attttaattttttt-------ccacccctctgcgctggattcaaatctgttaatcaaaag 293
||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attttaa-------aaagagcccacccctctgcgctggattcaaatctgttaatcaaaag 493
Query: 294 tctggagatgacctaaaaccagcctttagcctgacatcaggaccctctacaggcctttat 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tctggagatgacctaaaaccagcctttagcctgacatcaggaccctctacaggcctttat 553
Query: 354 acccactgaccgttccatttcatttaaatgaatgatttttcaagcaacaagttcaaagtg 413
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 554 acccactgaccgttccatttcatttaaatgaatgatttt-caagcaacaagttcaaagtg 612
Query: 414 ttatctcatgggagttgtacaaaattccccagggcagaccttattgttactccgtgcagt 473
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ttgtctcatgggagttgtacaaaattccccagggcagaccttattgttactccgtgcagt 672
Query: 474 gctttgaaagtgggatgtgtcc 495
| ||||||||||||||||||||
Sbjct: 673 ggtttgaaagtgggatgtgtcc 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 894
Length adjustment: 10
Effective length of query: 485
Effective length of database: 884
Effective search space: 428740
Effective search space used: 428740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
