TTCTCTCTCACAGTCATATTAAAATAATTTTTTCTATAATTGCGGCCGCT
AAAGAATCCTAGTCGCAGAGGAGCGGCGGAATCCTANTTTTACACTGAGA
TGTCTCCATCAAATCTCTACCCTTAAGGCTCAGGATACCTTCTTGGATAA
AGAGGCAGAGACTTTACGAGCAAAAGGGAGCCACATGGAAGCCTCATGGA
AACATCGGTCTCTCCCCAAGAAAAATACCGTGGGATTTTGGGCGGGTCCC
TCTCCTTCTCGTGTTTTCATACTTCCTCTCCTCAAAATTCATTTGGTGTC
ATCTCTTCCTGTGTCTTTTCCTCGGGGGCGGGCTATTCCCTTTTTTTTCT
CCTCCCCTTCGCGTCCGGTTTCCCCTTACCTTCCCCTTTCCCTTATTTTC
TTTCCCTCCCCGTCCTTCTCCTCCCCTTTCGACTTTCTCGTACCCACGGC
AACTTACTTCTTTCCCCCCCCTTCCTGAATGGGGTTCTTTTTCTTTTTTT
CTCCCCCTGCCCGTTCGTCGTTTTCGCACCTTTCTCCCTTCCTCTGCCCT
CGTTCTTTTCCTTCTTTCCTTCCCCTCCTTCCCCTTTTCCTCCTCCTCCT
CTCCTTCTTCCCCCTTCTCTTGTCCCCCTCTTTTTTTTCCTTCCCGTACT
TTCCCCCCTTTCTACATTTTTCTTCCCTCT

GCGAAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAATTCCATGTATAGCAAAGCCATCT
CTCTCACAATTTTCTAACCAGCGAACATTGCGTGGGAAATTGGTTCCATA
TGGTTTCAAGTCATTTATGCAACTTGAATAATTAAAATATTCCTTGGTAA
GAGCCGCCTGGTGTCTTTAGAGTCAGGAAATTATCTTATGCCAAAAGTAG
ACAAACTCAAAAACCCAAAGGTCAAGTTAAGTTTGAAATTTCACATTCCA
AAATGCAATTATCCTAACAAAAATTGCTCTATATTCCCCTCTTATCACAC
AGTAGAGAAGTGAAAAGCCCCTTTATTCTTGGGCAATGTAGTTACTCGTT
TTCATACTTGAAGAGGGTCTGCTTATATATCTTTCCTTTGCTAAATCTAC
AGCTAAATATTACTGGAAAACTTCCTAGAGCAGTAATGACATTTTCAATA
AAGTTCTGTCAGCTGTTTTTAGAATAATAAATACATTTTCTTTCAATATA
TCTAAATATTTCTACTAGGAGTTGCAATCATAATTCCCATTTTGTAGATT
TTTGAATCAAGGGCTTCATATATTAGGTAGCCCAAGAGAGCATATTCTAA
CTGAGTAGACTGCTTTAATGCTTTACACACGCTTACTGTTTGGCAGGTGC
TAAGGAGCCTGAAAATAACTTATCCCCCAGCGAAAATTGTATAAACCCTC
AGTT

Query= MSMg01no450_e04.g1 MSMg01no450_e04.g1 CHROMAT_FILE:
MSMg01no450_e04.g1 PHD_FILE: MSMg01no450_e04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:07 2005
         (548 letters)



>mm_chr1_69482330_69483277
          Length = 948

 Score = 1044 bits (540), Expect = 0.0
 Identities = 546/548 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aattccatgtatagcaaagccatctctctcacaattttctaaccagcgaacattgcgtgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 aattccatgtatagcaaagccatctctctcacaattttctaaccagcgaacattgcgtgg 829

                                                                       
Query: 61  gaaattggttccatatggtttcaagtcatttatgcaacttgaataattaaaatattcctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 828 gaaattggttccatatggtttcaagtcatttatgcaacttgaataattaaaatattcgtt 769

                                                                       
Query: 121 ggtaagagccgcctggtgtctttagagtcaggaaattatcttatgccaaaagtagacaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 ggtaagagccgcctggtgtctttagagtcaggaaattatcttatgccaaaagtagacaaa 709

                                                                       
Query: 181 ctcaaaaacccaaaggtcaagttaagtttgaaatttcacattccaaaatgcaattatcct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 ctcaaaaacccaaaggtcaagttaagtttgaaatttcacattccaaaatgcaattatcct 649

                                                                       
Query: 241 aacaaaaattgctctatattcccctcttatcacacagtagagaagtgaaaagccccttta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 aacaaaaattgctctatattcccctcttatcacacagtagagaagtgaaaagccccttta 589

                                                                       
Query: 301 ttcttgggcaatgtagttactcgttttcatacttgaagagggtctgcttatatatctttc 360
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ttcttgggcaacgtagttactcgttttcatacttgaagagggtctgcttatatatctttc 529

                                                                       
Query: 361 ctttgctaaatctacagctaaatattactggaaaacttcctagagcagtaatgacatttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ctttgctaaatctacagctaaatattactggaaaacttcctagagcagtaatgacatttt 469

                                                                       
Query: 421 caataaagttctgtcagctgtttttagaataataaatacattttctttcaatatatctaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 caataaagttctgtcagctgtttttagaataataaatacattttctttcaatatatctaa 409

                                                                       
Query: 481 atatttctactaggagttgcaatcataattcccattttgtagatttttgaatcaagggct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 atatttctactaggagttgcaatcataattcccattttgtagatttttgaatcaagggct 349

                   
Query: 541 tcatatat 548
           ||||||||
Sbjct: 348 tcatatat 341


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space:   504644
Effective search space used:   504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)