CGCCTATAATTTGCGGCCGGAANACGACNTCACTTCGTTACTGGATCCGN
GGNAANCCAGATTGCTATAACCAGCTTGCAATCCCACCAGCAATGGAAGA
GTGTTCCTCTTTCTCTTTATCCTCACCAGCATCTGCTTTCACCTGAATTT
TTGATCTTAGACATTCTGACTGGTGTGAGGTGAAATTTCAGGGTTGTTTA
ATTTGCATTTCCCTGATGATTAATGTTGCTGAACATTTTTTCAGGTGTTT
CTCAACCATTCAGTATTCCTCAGTTGAGAATTCTTTGTTTAGCTCTATAC
CTTGGACATAGTATCACTGGATGATCCAGCAATAACACTCCTGGACATAT
ACCCAGAATATGCTCCCACTTGTAATAAGGACACATGCTCCACTATGTTC
ATAGCAGCTTTACCCATAATAGCCAAAAGCTGGAAAGAACCCAGATGTCC
CTCAACAGAGGAATGGGTACAGAAAATGTGATACATTTACACACTGGAAT
ACTACTCAGGTATTATAAACTATAAATTTATGAAATTCTTATGCAAGTAT
ATGGATCTGGAGAGCATCATCCTGAGTGAGGTAACTCATTCACAAAAGAA
CTCACATGAAATGTACTCAATGATACGTGGATATTACCCCTTCATTTTTT
TTTTTTTCTTATCCCATTTGTATACCCCCGACCTTCATCAAAACTGTCCA
TCCCTTCGTGCACCCTATGCTTCTCCCTATTAATGCCAAATTAAG

NCACGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTTCGAAAAATTCCTGCCTTAACTTTATTTGATG
ATGAAATGTGTTATGTAAGTCATCCATAAACCGTTTTCCCTCANATAATT
AAAATCAAAATAAAAGTAACAGTTTATTTTGAAATACACTGGGAACTTTA
AAGATCATTGTTTAGTGTTTTTTATTTTATAATTTTAAAGACTTATTTTT
AATTATTTGTTTTTATATGTTCATTCTGCATTGTTTATTCCTTTATGCTT
TGTACATTATGATCTAAGTTTAGTGTTTTTTAATATGAAACTATGACCTT
ATAAAAGATTTCAGTTGTGCTAGGACCTCAGGTAGTTTGCAAATATACAT
GTTTTTGCAGCGCAAGTGTGAAAATTAGAAATACTGGCAAATTACTAATT
CCTATTCACATTCCAATGCAATGGACTCCTGCAGACACTTCCAGTAGCTC
ATAAATGTTAGTAAGGTGTTCATGTAACAATCATTTATCCATTTTACACT
AATCATGGGTGAAAACCATAGCACATAGAATGCACAAATTAAATGGGACT
GGAACTGAACATAGATTCTGGTTCTGGCCTTTGTTACTGATAAGTATGTG
GATCACATAAACCCCCATCTTTAATTTTCCTCAAGCACAATTATTAGTAT
ACAACAGTCCTCCAATTTCATTTATTGTGTGAATTCTAATTATC

Query= MSMg01no450_l11.g1 MSMg01no450_l11.g1 CHROMAT_FILE:
MSMg01no450_l11.g1 PHD_FILE: MSMg01no450_l11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:44 2005
         (599 letters)



>mm_chr1_112804471_112805469
          Length = 999

 Score = 1114 bits (576), Expect = 0.0
 Identities = 593/599 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgccttaactttatttgatgatgaaatgtgttatgtaagtcatccataaaccgttttcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 ctgccttaactttatttgatgatgaaatgtgttatgtaagtcatccataaaccgttttcc 929

                                                                       
Query: 61  ctcanataattaaaatcaaaataaaagtaacagtttattttgaaatacactgggaacttt 120
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 ctcaaataattaaaatcaaaataaaagtaacagtttattttgaaatacactgggaacttt 869

                                                                       
Query: 121 aaagatcattgtttagtgttttttattttataattttaaagacttatttttaattatttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 aaagatcattgtttagtgttttttattttataattttaaagacttatttttaattatttg 809

                                                                       
Query: 181 tttttatatgttcattctgcattgtttattcctttatgctttgtacattatgatctaagt 240
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 808 tttttatatgttcattctgcattgtttattcctttatgctttgtacgttatgatctaagt 749

                                                                       
Query: 241 ttagtgttttttaatatgaaactatgaccttataaaagatttcagttgtgctaggacctc 300
           ||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 ttagtgttccataatatgaaactatgaccttataaaagatttcagttgtgctaggacctc 689

                                                                       
Query: 301 aggtagtttgcaaatatacatgtttttgcagcgcaagtgtgaaaattagaaatactggca 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 688 aggtagtttgcaaatatacatgtttttgcagcgcaagtgtgaaaattagaaacactggca 629

                                                                       
Query: 361 aattactaattcctattcacattccaatgcaatggactcctgcagacacttccagtagct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aattactaattcctattcacattccaatgcaatggactcctgcagacacttccagtagct 569

                                                                       
Query: 421 cataaatgttagtaaggtgttcatgtaacaatcatttatccattttacactaatcatggg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 cataaatgttagtaaggtgttcatgtaacaatcatttatccattttacactaatcatggg 509

                                                                       
Query: 481 tgaaaaccatagcacatagaatgcacaaattaaatgggactggaactgaacatagattct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tgaaaaccatagcacatagaatgcacaaattaaatgggactggaactgaacatagattct 449

                                                                      
Query: 541 ggttctggcctttgttactgataagtatgtggatcacataaacccccatctttaatttt 599
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ggttctggcctttgttactgataagtatgtggatcacataaacccccatctttaatttt 390


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space:   582521
Effective search space used:   582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)