Query= MSMg01no451_e08.b1 MSMg01no451_e08.b1 CHROMAT_FILE:
MSMg01no451_e08.b1 PHD_FILE: MSMg01no451_e08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:28 2005
(363 letters)
>mm_chr1_13401596_13402356
Length = 761
Score = 627 bits (324), Expect = 0.0
Identities = 353/366 (96%), Gaps = 8/366 (2%)
Strand = Plus / Minus
Query: 1 tcaatataacaccagtattaatctccattagtgaacattatcagagattaccatctccat 60
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 698 tcaatataacaccagtattaatctccattagtgaacaaaatcagagattaccatctccat 639
Query: 61 aaagcaaaaactggctggtagtggtgcatgcctctgaccccagcacttgggaggccgagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 aaagcaaaaactggctggtagtggtgcatgcctctgaccccagcacttgggaggccgagg 579
Query: 121 caggaggattgagagctttttaaactgtaattgttttatacaacaaataaggtgatgggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 caggaggattgagagctttttaaactgtaattgttttatacaacaaataaggtgatgggt 519
Query: 181 ttcagtatgatgtctctactcatgctatctctttattttgttctttgcccctccactatc 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ttcagtgtgatgtctctactcatgctatctctttattttgttctttgcccctccactatc 459
Query: 241 tg---ttttccatcaccatccttcttgctggccaccttcctcctgaaagagtccctcctg 297
|| ||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tgccc----ccaacaccatcc-tcttgctggccaccttcctcctgaaagagtccctcctg 404
Query: 298 ctctcatatcatatgtattaccctgtctaggttcccagtcctgtctttacacctgttcct 357
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 403 ctctcatatcatatgtattaccctgtctagtttcccagtcctgtctttacacctgttcct 344
Query: 358 ctcatc 363
||||||
Sbjct: 343 ctcatc 338
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 761
Length adjustment: 9
Effective length of query: 354
Effective length of database: 752
Effective search space: 266208
Effective search space used: 266208
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_e08.g1 MSMg01no451_e08.g1 CHROMAT_FILE:
MSMg01no451_e08.g1 PHD_FILE: MSMg01no451_e08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:28 2005
(537 letters)
>mm_chr1_13216083_13217019
Length = 937
Score = 959 bits (496), Expect = 0.0
Identities = 531/552 (96%), Gaps = 15/552 (2%)
Strand = Plus / Plus
Query: 1 acttagtttatgctatgtactaaagccaatttacagattcacacctcacattgaaatctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttagtttatgctatgtactaaagccaatttacagattcacacctcacattgaaatctg 260
Query: 61 tattgctaagtagccaagggctaacgttcaggcccaagcttcactgcgtggttagccatg 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 tattgctaagtagccaagggctaacgttgaggcccaagcttcactgcgtggttagccatg 320
Query: 121 tgaccttaaaacttgctactgcacaccactgattttctgtaagctggagtcacacctctg 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 tgaccttaaaacttgctactgcacactactgattttctgtaagctggagtcacacctctg 380
Query: 181 gcatccgtagcacaggctgcctagaggaggtggaaggggaaggtctgggacctcgatgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcatccgtagcacaggctgcctagaggaggtggaaggggaaggtctgggacctcgatgga 440
Query: 241 gagaactcttgctcttcactagcaagtcactgttgaggtagtcatccatatacgtcttcc 300
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaggacccttgctcttcactagcaagtcactgttgaggtagtcatccatatacgtcttcc 500
Query: 301 tgccttgcctgtcatgggtgagttggtcttcattcactacaggcagagcgccatggaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgccttgcctgtcatgggtgagttggtcttcattcactacaggcagagcgccatggaaaa 560
Query: 361 agtcacaagatctaaccaacaagggcttctgtgcacaaaatgattgttacttcagtatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtcacaagatctaaccaacaagggcttctgtgcacaaaatgattgttacttcagtatat 620
Query: 421 aacgcctgccttcctgtcagtgtagatggacatggcaggggggcagagaca--------- 471
||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 621 aacacctgccttcctgtcactgtagatggacatggcaggggggcagagacagaatactgc 680
Query: 472 ------agagagaaacaaggcaaatggagatgagtacagggacagtgctgcgatccattc 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgttcaagagagaaacaaggcaaatggagatgagtacagggacagtgctgcgatccattc 740
Query: 526 ccacactgagat 537
||||||||||||
Sbjct: 741 ccacactgagat 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
