Query= MSMg01no451_h11.b1 MSMg01no451_h11.b1 CHROMAT_FILE:
MSMg01no451_h11.b1 PHD_FILE: MSMg01no451_h11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:43 2005
(674 letters)
>mm_chr1_138943673_138944743
Length = 1071
Score = 1079 bits (558), Expect = 0.0
Identities = 616/638 (96%), Gaps = 6/638 (0%)
Strand = Plus / Minus
Query: 37 tcctcctcttcctctcactcctcctcctctttctcctccccttcctcttcttcttttgaa 96
||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 1067 tcctcctcttcctct---tcctcttcctcttcctcctccccttcctcttcttcttttgaa 1011
Query: 97 caagattttcctgtgtagccctggctgtcctagaatacactgtgtactcctggctggcct 156
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1010 caaggttttcctgtgtagccctggctatcctagaatacactgtgtactcctggctggcct 951
Query: 157 caaactcacagaaatccacctgcctctgcttcctgagtgctgagattaaaggcatgcgcc 216
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 950 caaactcacagaaatccacctgcctctgcttcctgagtgctgagattaaaggcatgtgcc 891
Query: 217 accaccaccacctgaccttgaacatccaaatcttaaacctctttggtctctccaagaaga 276
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 890 gccaccaccacctgaccttgaacatccaaatcttaaaccactttgatctctccaagaaga 831
Query: 277 catagttgactgtgtctatgcagaaccctaagacaggagctgggaagtgtagctcaggct 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 catagttgactgtgtctatgcagaaccctaagacaggagctgggaagtgtagctcaggct 771
Query: 337 atcaacagaattctaatgagacaacctcactgaagcagattaggcctctgtcaaaccaaa 396
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 770 atcaacagaattctaatgagacaacttcactgaagcagattaggcc---gtcaaaccaaa 714
Query: 397 gtattagggcatgacttgaagcttattgtaattcaaagacgttaaagagagaaaagaaaa 456
||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 713 gtattagggaatgccttgaagcttattgtaattcaaagacattaaagagagaaaagaaaa 654
Query: 457 ctgaactgcaggtactcctggtaaggtgaagggttattctgggggaaaacaaaatttaaa 516
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 653 ctgaactgcaggtactcctggtaaggtgaagggttattctggggaaaaacaaaattaaaa 594
Query: 517 acaaacaaacaaaaaggtcaaccattgaaacgaaaacatgagaaagaaggacctgaaaac 576
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 acaaacaaacaaaaaggccaaccattgaaacgaaaacatgagaaagaaggacctgaaaac 534
Query: 577 aggataaagaagtggatccacatgaagggtgaatgggagacctgtgtgtgtggcaaagca 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aggataaagaagtggatccacatgaagggtgaatgggagacctgtgtgtgtggcaaagca 474
Query: 637 gaggacactgcagagcatgcacaaccctgggttccaga 674
|||| |||||||||||||||||||||||||||||||||
Sbjct: 473 gagggcactgcagagcatgcacaaccctgggttccaga 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1071
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1061
Effective search space: 704504
Effective search space used: 704504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_h11.g1 MSMg01no451_h11.g1 CHROMAT_FILE:
MSMg01no451_h11.g1 PHD_FILE: MSMg01no451_h11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:43 2005
(640 letters)
>mm_chr1_138795941_138796980
Length = 1040
Score = 1143 bits (591), Expect = 0.0
Identities = 630/649 (97%), Gaps = 10/649 (1%)
Strand = Plus / Plus
Query: 1 tctgggcacaaagattcctaggagcattttccttgagttccccggggatacacaacagga 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 191 tctgggcacaaagattcctaggagcattttccttgagttccccagggatacacaacagga 250
Query: 61 cttgttccctgacatgattcaaattcctctttcaggtcaccgtgccaagtgtaggtccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cttgttccctgacatgattcaaattcctctttcaggtcaccgtgccaagtgtaggtccta 310
Query: 121 tgtcttcagaggcacccagaagtgggttcgcagaagaggctggcaattggccaagagctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tgtcttcagaggcacccagaagtgggttcgcagaagaggctggcaattggccaagagctc 370
Query: 181 cagggtcagaagttagatctcaaggtgcagaaaagttatttctaggtaagccaaaataat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 371 cagggtcagaagttagatctcaaggtgcagaaaagttatttctaggtaagccaaaacaat 430
Query: 241 ttttgctttgtgaaaacattttcaacagtgtattatcgggaaatatttatcccgaggtgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 431 ttttgctttgtgaaaacattttcaacagtgtattatcgggaaatatttatcccgaagcgc 490
Query: 301 taaacatagcacagtgatgctaaatggttcacatgaaaactccctgtcattgggagtgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 taaacatagcacagtgatgctaaatggttcacatgaaaactccctgtcattgggagtgtg 550
Query: 361 gatggcaatacctcatgccccacccccacccccacacaacacaccacttaccagtcagaa 420
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 551 gatggcaatacctcatgccccacccccaccccctcacagcacaccacttaccagtcagaa 610
Query: 421 tgagtggtcaccaacactccacccccaacacacacacacacacacacacacacacacaca 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tgagtggtcaccaaaactccacccccaacacacacacacacacacacacacacacacaca 670
Query: 481 cacacacac----------tacttacagctcagaatgagtgttcaccattaaccctctgt 530
||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 671 cacacacacacacacacactacttacagctcagaatgagtgttcaccattaaccctctat 730
Query: 531 gctgagtcacagcctggtcctggccctgtgctcatagtcggtgcttgactggtatttact 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gctgagtcacagcctggtcctggccctgtgctcatagtcggtgcttgactggtatttact 790
Query: 591 caagacagaaatgatcaagtaagtacctttggtccaatgatttcatttt 639
||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 791 caagacagaaatgatcaagtaagaacctttggtccaatgatttcatttt 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
