GGAGTCTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTGCTTTTCTTGGTGAGTATCCTTTAGCATACAGTGTGGTAGA
AGTGATACTCGGTTGTTGCTGAGATTATATCATAAAAGAACCTGAGGAAT
CAGGCTCCAGTTCTTAGTACCCTCCCCTCTCCCTCTTTCATTCTACTCAG
AATGAAGTCTGCTGCCAGTTCATAAAAATACTCAGGTAGCTTTATAGCCA
TCCAAATAGCGAGAAAATTAGATCCACAGTCAAGAGCCAACAAGAAAGTG
CATGAGTTTTAAGTGCATTTTCCAGCCCTGGACAAGGCTTGGCATGAGGG
TGATTCAGCCAATATGTTTGCTGCAGAGACACAAAGCATTGGATCATAAC
CCTGCCAAGCCACTGTCAGGCTCTGGGCCCTAAACTGTTGGATAGTGTTT
GTAGTTTAACACACTAAAACTCAGTAGAAGTCTTATGCAAAACTAGATAA
TACAGAACTACATGCTATATATTTTATAATTTTGTGGCATCTTAAATTTC
CAGGTATCTCTATGTTCCTGATGAGGATGCTTCCCTCTTTAGCTCAGCTG
GAAAATTAATTGCTGCTGTAAATTTACTCCTTCACTAAAATTACCAAGGT
TAGAAACAGATTTTACATTTGCACAATATAGAGCTACACTTGCAATGCTT
AGTCATTTAAACAGGTTAGAATTAAATATCATCAGTGAGAAGGA

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTACTCTCTCCCACTCTCTAGTT
CTGAACTATGATGCCCATTTCCTCTACAGCATCATTTAATATGTGATATG
AATATTGAACAGGAAGTGTGGATGGAATGTATTGAGAATATGCATTGTGA
AAGGGACTCANAAATAGTGCTATAGAAAGATCATCCAAAACCTGTTGATC
TGCCAATACAAGACAGTGATCTACTAAGCGGAGGTAAGCCCAGATGTTTG
TGTAAAATCTGTGTGGTTTGCTCAATAGAGAGCCTGCTCTCTGAAGAGTT
ATTAGAGAGCCTAAGATGAATGTTTTAATAATTAAAAGTATTCATATTTA
TATTCCCTTTTGTCTATTTCCCCCTACCTTTTTCTTTTACTCCATTCTCA
TCTCTTTATGACCTCATCCCATTATGATTCTGAACTATTGTGGGAGTGTC
CTAGAATAATTTTCAACCCTTCACAGTATACTTAAGGTTTTGATGACCCC
ATTTCTACCCTAAGTTATCAATTTGAAATATTAATTTAAACACACATTTT
CAGCTTTACTCTGTCATATATATCCTAGGTAAGGGAGACACAGTTCAACA
AAATCTATCTCAAGACTCCTGCATGTTCCTCATCTGCTCTAGTAAAGTAG
CCAAGGGCTATTAAAATATTTTGAGTTCAAAAGATATTTTTAAAATATAA
N

Query= MSMg01no451_o11.b1 MSMg01no451_o11.b1 CHROMAT_FILE:
MSMg01no451_o11.b1 PHD_FILE: MSMg01no451_o11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:19 2005
         (648 letters)



>mm_chr1_68819631_68820678
          Length = 1048

 Score = 1222 bits (632), Expect = 0.0
 Identities = 641/644 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgcttttcttggtgagtatcctttagcatacagtgtggtagaagtgatactcgg 64
           ||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgctagacttggtgagtatcctttagcatacagtgtggtagaagtgatactcgg 264

                                                                       
Query: 65  ttgttgctgagattatatcataaaagaacctgaggaatcaggctccagttcttagtaccc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgttgctgagattatatcataaaagaacctgaggaatcaggctccagttcttagtaccc 324

                                                                       
Query: 125 tcccctctccctctttcattctactcagaatgaagtctgctgccagttcataaaaatact 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcccctctccctctttcattctactcagaatgaagtctgctgccagttcataaaaatact 384

                                                                       
Query: 185 caggtagctttatagccatccaaatagcgagaaaattagatccacagtcaagagccaaca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caggtagctttatagccatccaaatagcgagaaaattagatccacagtcaagagccaaca 444

                                                                       
Query: 245 agaaagtgcatgagttttaagtgcattttccagccctggacaaggcttggcatgagggtg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agaaagtgcatgagttttaagtgcattttccagccctggacaaggcttggcatgagggtg 504

                                                                       
Query: 305 attcagccaatatgtttgctgcagagacacaaagcattggatcataaccctgccaagcca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 attcagccaatatgtttgctgcagagacacaaagcattggatcataaccctgccaagcca 564

                                                                       
Query: 365 ctgtcaggctctgggccctaaactgttggatagtgtttgtagtttaacacactaaaactc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctgtcaggctctgggccctaaactgttggatagtgtttgtagtttaacacactaaaactc 624

                                                                       
Query: 425 agtagaagtcttatgcaaaactagataatacagaactacatgctatatattttataattt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agtagaagtcttatgcaaaactagataatacagaactacatgctatatattttataattt 684

                                                                       
Query: 485 tgtggcatcttaaatttccaggtatctctatgttcctgatgaggatgcttccctctttag 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgtggcatcttaaatttccaggtatctctatgttcctgatgaggatgcttccctctttag 744

                                                                       
Query: 545 ctcagctggaaaattaattgctgctgtaaatttactccttcactaaaattaccaaggtta 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctcagctggaaaattaattgctgctgtaaatttactccttcactaaaattaccaaggtta 804

                                                       
Query: 605 gaaacagattttacatttgcacaatatagagctacacttgcaat 648
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gaaacagattttacatttgcacaatatagagctacacttgcaat 848


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space:   662244
Effective search space used:   662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no451_o11.g1 MSMg01no451_o11.g1 CHROMAT_FILE:
MSMg01no451_o11.g1 PHD_FILE: MSMg01no451_o11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:19 2005
         (666 letters)



>mm_chr1_68955707_68956772
          Length = 1066

 Score = 1282 bits (663), Expect = 0.0
 Identities = 665/666 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tactctctcccactctctagttctgaactatgatgcccatttcctctacagcatcattta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 tactctctcccactctctagttctgaactatgatgcccatttcctctacagcatcattta 807

                                                                       
Query: 61  atatgtgatatgaatattgaacaggaagtgtggatggaatgtattgagaatatgcattgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 atatgtgatatgaatattgaacaggaagtgtggatggaatgtattgagaatatgcattgt 747

                                                                       
Query: 121 gaaagggactcanaaatagtgctatagaaagatcatccaaaacctgttgatctgccaata 180
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gaaagggactcaaaaatagtgctatagaaagatcatccaaaacctgttgatctgccaata 687

                                                                       
Query: 181 caagacagtgatctactaagcggaggtaagcccagatgtttgtgtaaaatctgtgtggtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 caagacagtgatctactaagcggaggtaagcccagatgtttgtgtaaaatctgtgtggtt 627

                                                                       
Query: 241 tgctcaatagagagcctgctctctgaagagttattagagagcctaagatgaatgttttaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgctcaatagagagcctgctctctgaagagttattagagagcctaagatgaatgttttaa 567

                                                                       
Query: 301 taattaaaagtattcatatttatattcccttttgtctatttccccctacctttttctttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 taattaaaagtattcatatttatattcccttttgtctatttccccctacctttttctttt 507

                                                                       
Query: 361 actccattctcatctctttatgacctcatcccattatgattctgaactattgtgggagtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 actccattctcatctctttatgacctcatcccattatgattctgaactattgtgggagtg 447

                                                                       
Query: 421 tcctagaataattttcaacccttcacagtatacttaaggttttgatgaccccatttctac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tcctagaataattttcaacccttcacagtatacttaaggttttgatgaccccatttctac 387

                                                                       
Query: 481 cctaagttatcaatttgaaatattaatttaaacacacattttcagctttactctgtcata 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cctaagttatcaatttgaaatattaatttaaacacacattttcagctttactctgtcata 327

                                                                       
Query: 541 tatatcctaggtaagggagacacagttcaacaaaatctatctcaagactcctgcatgttc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tatatcctaggtaagggagacacagttcaacaaaatctatctcaagactcctgcatgttc 267

                                                                       
Query: 601 ctcatctgctctagtaaagtagccaagggctattaaaatattttgagttcaaaagatatt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctcatctgctctagtaaagtagccaagggctattaaaatattttgagttcaaaagatatt 207

                 
Query: 661 tttaaa 666
           ||||||
Sbjct: 206 tttaaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space:   692736
Effective search space used:   692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)