GCGACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAAGGTTCCTACCTAAACATGATAAAAGCAATCTACAGCAA
ACCAGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAGTCCCAC
TAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAAC
ATAGTACTTGAAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAA
GGGGATACAAATTGGAAAAGAGGAAGTCAAAATATCACTTTTTGCAGATG
ATATGATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCTA
AACCTGATAAACAGCTTCGGTGAAGTAGCTGGATATAAAATAAACTCAAA
CAAGTCAATGGCCTTTCTCTACACAAAGAATAAACAGGCTGAGAAAGAAA
TTAGGGAAACAACACCCTTCTCAATAGTCACAAATAATATAAAATATCTT
GGCATGACTCTAACTAAGGAGGTAAAAGATCTGTATGATAAAAACTTCAA
ATCTCAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCA
TGCTCATGGATTGGCAGGATAAACATTGTAAAAATGGCTATATTGCCAAA
AGCAATCTACAGATTCAATGAAATCCCCATCAAAATTCCAAGTCAATTCT
TCAACGAATTAGAAGGAGCAATTTGCAAATTCATCTGGAAN

NTTTTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTCTTGAGGTTTATTTCTG
ATTTGGAATACCACATATTAATAATAGTTTCCCTCAAGTATTTGGAGAGC
CGAGAGTCATCAGAGACCAAGTATTGATAATCTTGTAACAAGACACACCA
TATAAGCATAGTCAAGGTCTTTTGAACTTCTCTGTAGATTTTAAAATTGG
TGTCTTGGTTTCTACCCCAAAGGCCTGCAGAGATTTCAAATGAGATTATT
AAGAATCATCAGATCTTTCAGAGGAACATACTAATAATGTGGCATGTTAT
ATTTTATACTATATACATACATTATTGCTCAGCTCTTTTTATATATATAT
GATATATATACATATATACATGTATACAATATCATATATATGTATATATA
TGATATGTGTGTATGTTTGTATATATATATATATATATATTTATATTAAA
AACTTTGGACAAGTGTACCAGGAGTTTTAGACAAATATGCTTCTAGATTA
CTGAGTCTAATAGGAAGTTGTCAGACATTTTTGCTCATTTCCTGAGGAAA
ATGAATAAATCATGGCATATTAACATACATAATTATGGGCTATATGAATG
AACTGACTGATAAACATGATGGTTATTTTAAATACCATAAACAGGATCAT
TCTATCAGTTACATTAAGGAATATGCAAGAAGAGTGG

Query= MSMg01no452_a09.g1 MSMg01no452_a09.g1 CHROMAT_FILE:
MSMg01no452_a09.g1 PHD_FILE: MSMg01no452_a09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:28 2005
         (657 letters)



>mm_chr1_177337234_177338290
          Length = 1057

 Score =  984 bits (509), Expect = 0.0
 Identities = 509/509 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctcttgaggtttatttctgatttggaataccacatattaataatagtttccctcaagta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tctcttgaggtttatttctgatttggaataccacatattaataatagtttccctcaagta 450

                                                                       
Query: 61  tttggagagccgagagtcatcagagaccaagtattgataatcttgtaacaagacacacca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tttggagagccgagagtcatcagagaccaagtattgataatcttgtaacaagacacacca 390

                                                                       
Query: 121 tataagcatagtcaaggtcttttgaacttctctgtagattttaaaattggtgtcttggtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tataagcatagtcaaggtcttttgaacttctctgtagattttaaaattggtgtcttggtt 330

                                                                       
Query: 181 tctaccccaaaggcctgcagagatttcaaatgagattattaagaatcatcagatctttca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tctaccccaaaggcctgcagagatttcaaatgagattattaagaatcatcagatctttca 270

                                                                       
Query: 241 gaggaacatactaataatgtggcatgttatattttatactatatacatacattattgctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gaggaacatactaataatgtggcatgttatattttatactatatacatacattattgctc 210

                                                                       
Query: 301 agctctttttatatatatatgatatatatacatatatacatgtatacaatatcatatata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 agctctttttatatatatatgatatatatacatatatacatgtatacaatatcatatata 150

                                                                       
Query: 361 tgtatatatatgatatgtgtgtatgtttgtatatatatatatatatatatttatattaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tgtatatatatgatatgtgtgtatgtttgtatatatatatatatatatatttatattaaa 90

                                                                       
Query: 421 aactttggacaagtgtaccaggagttttagacaaatatgcttctagattactgagtctaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89  aactttggacaagtgtaccaggagttttagacaaatatgcttctagattactgagtctaa 30

                                        
Query: 481 taggaagttgtcagacatttttgctcatt 509
           |||||||||||||||||||||||||||||
Sbjct: 29  taggaagttgtcagacatttttgctcatt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 82
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space:   677409
Effective search space used:   677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)