Query= MSMg01no452_e10.b1 MSMg01no452_e10.b1 CHROMAT_FILE:
MSMg01no452_e10.b1 PHD_FILE: MSMg01no452_e10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:47 2005
(607 letters)
>mm_chr1_135908041_135909047
Length = 1007
Score = 1089 bits (563), Expect = 0.0
Identities = 596/607 (98%)
Strand = Plus / Minus
Query: 1 attctgtgttctgctttctcctttccttacatttattccatctgggtccccagccaatag 60
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 attctgtgacctgctttctcctttccttacatttattccatctgggtccccagccaatag 936
Query: 61 aatgatgacactggaattcagggccactctgtttcttaatcctctctggaaaccctctcg 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 935 aatgatgacactggaattcagggccactccgtttcttaatcctctctggaaaccctctcg 876
Query: 121 cagatcagtctattaatctcctagtcccttctcaatccaactaagttgactatcgcatta 180
||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 875 cagatcagtctattaatctcctagttgcttctcaatccaaccaagttgactatcgcatta 816
Query: 181 accattactgccaccgaggccaaacaatcacagagaagtcaccccaatactgctatagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 accattactgccaccgaggccaaacaatcacagagaagtcaccccaatactgctatagag 756
Query: 241 aggtgtggctgccacacccacttgtcagttctagcacctgaggcccatggagggactgct 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 aggtgtggccgccacacccacttgtcagttctagcacctgaggcccatggagggactgct 696
Query: 301 gccaccacacttaaaatccacgtgggtggaggtgacacctgctgattgtccctgtccaga 360
|||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 695 gccaccacacttgaaatccacgtgggtggaggtgatacctgctgatcgtccctgtccaga 636
Query: 361 aaagcaaacaaatcagctgagcttcacagaagagccaggctggagaggtgtctgctgaaa 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 635 aaagcaaacaaatcagctgagcttcacagaagagccaggctggagaggtgtctgttgaaa 576
Query: 421 aagctgcaggaagggacactgcaggaagggacacagcgactccagacttccctgccttcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 aagctgcaggaagggacactgcaggaagggacacagcgactccagacttccctgccttcc 516
Query: 481 tgtgactacctcgtggtcacagggttaggatctagacatctgggctttgaggtacgaagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tgtgactacctcgtggtcacagggttaggatctagacatctgggctttgaggtacgaagc 456
Query: 541 gttcacaggccccacccaccattgtcctttgagatttcttctcccactcggagcgccagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gttcacaggccccacccaccattgtcctttgagatttcttctcccactcggagcgccagg 396
Query: 601 gaaggaa 607
|||||||
Sbjct: 395 gaaggaa 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_e10.g1 MSMg01no452_e10.g1 CHROMAT_FILE:
MSMg01no452_e10.g1 PHD_FILE: MSMg01no452_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:47 2005
(607 letters)
>mm_chr1_135728219_135729225
Length = 1007
Score = 1079 bits (558), Expect = 0.0
Identities = 602/634 (94%), Gaps = 27/634 (4%)
Strand = Plus / Plus
Query: 1 caagggatggtgcctcccctttcccagaagagggtgagagagatggctttctgaactgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagggatggtgcctcccctttcccagaagagggtgagagagatggctttctgaactgaa 260
Query: 61 gccagaagaacagagccaaactcatacaatttgaatttttatgaatcttattactatggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccagaagaacagagccaaactcatacaatttgaatttttatgaatcttattactatggc 320
Query: 121 ggtgttataaatgattaataaagcatttgaattgtccagtggagacgaggaagggggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 321 ggtgttataaatgattaataaagcatttgaattgtccagtggagacgaggaagggagaaa 380
Query: 181 gattaatatttctttagaacgacatccatcagggttttgggagagctcccacacattatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gattaatatttctttagaacgacatccatcagggttttgggagagctcccacacattatc 440
Query: 241 tcaggcagtttaacctagccgaggttaactcctcgcttcccaccgcttctcccttctttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaggcagtttaacctagccgaggttaactcctcgcttcccaccgcttctcccttctttt 500
Query: 301 ctctgctccatcagggcctttgtaaggacggcgggagcttctccattagtgtttattccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctctgctccatcagggcctttgtaaggacggcgggagcttctccattagtgtttattccc 560
Query: 361 aggagctgtctgggagctccaaccacgggcacagacagtcaggacctgctctcccaacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggagctgtctgggagctccaaccacgggcacagacagtcaggacctgctctcccaacat 620
Query: 421 aggttcataactgcaaacaaagtcaactggaggcttggggtgggggtgtcaggccgagaa 480
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 621 aggttcataactgcaaacaaagtcaactggaggcttggggtgggggggtcaggctgagaa 680
Query: 481 gagaagga---------------------------ggaggaggaggaggaggaggaagtc 513
|||||||| |||||||||||||||||||||||||
Sbjct: 681 gagaaggaagaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaagtc 740
Query: 514 agggagggagagtcagtgatgttttctctggttatctttccagtcagtcatgtcaccttt 573
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 741 agggagggagagtcagtgatgttttctctggttatctttccagtcagccatgtcaccttt 800
Query: 574 gttccttccttttcctcttcttcctcctcttcct 607
||||||||||||||||||||||||||||||||||
Sbjct: 801 gttccttccttttcctcttcttcctcctcttcct 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
