Query= MSMg01no452_g01.b1 MSMg01no452_g01.b1 CHROMAT_FILE:
MSMg01no452_g01.b1 PHD_FILE: MSMg01no452_g01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:55 2005
(450 letters)
>mm_chr1_191873586_191874436
Length = 851
Score = 688 bits (356), Expect = 0.0
Identities = 371/378 (98%), Gaps = 5/378 (1%)
Strand = Plus / Minus
Query: 17 gaattcacaaattt---actatcacatagctagattaaggaatctacccaaacatatgcc 73
||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaattcacaaa--taaaaatatcacatagctagattaaggaatctacccaaacatatgcc 319
Query: 74 cagtctcaaacttcatgcatcccaatgaacgtctaaccagtgagaatggctgttaaggaa 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cagtctcaaacttcatgcatcccaatgaacgtctaaccagtgagaatggctgttaaggaa 259
Query: 134 gcatggagtttctttttcaactatcacatacacactacaaaatctatcttttattttgag 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gcatggagtttctttttcaactatcacatacacactacaaaatctatcttttattttgag 199
Query: 194 tccctcatgggatctaaagcctatcaatttaactacattggctagccagagagttccaag 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tccctcatgggatctaaagcctatcaatttaactacattggctagccagagagttccaag 139
Query: 254 aatcttggtagctcttcttccccggtgtttagattatagatgtgcacagccaatcacagc 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 aatcttggtagctcttcttccccggtgtttagattatagatgtgcacagccaatcacagc 79
Query: 314 ttctaatgtgggttctgggattcaaactcaggtccttaagcacgtcattggttgagccct 373
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 78 ttctaatgtgggttctgggattcaaactcaggtccttaagcacatcattggttgagccct 19
Query: 374 ctcctctgcaactgtgcc 391
||||||||||||||||||
Sbjct: 18 ctcctctgcaactgtgcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 851
Length adjustment: 10
Effective length of query: 440
Effective length of database: 841
Effective search space: 370040
Effective search space used: 370040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_g01.g1 MSMg01no452_g01.g1 CHROMAT_FILE:
MSMg01no452_g01.g1 PHD_FILE: MSMg01no452_g01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:55 2005
(465 letters)
>mm_chr1_191693722_191694586
Length = 865
Score = 841 bits (435), Expect = 0.0
Identities = 457/465 (98%), Gaps = 3/465 (0%)
Strand = Plus / Plus
Query: 1 caggctcatttgatctcctccaggatgcagcttctggaggagggacgcagctctgtcctg 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggctcatttgatctcctccgggatgcagcttctggaggagggacgcagctctgtcctg 260
Query: 61 cagggggcgccacttcgacaacatctgcctcccccagccagaggcggatggctggcagca 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 cagggggcgccacttcgacaacatctgcctcccccagccagaggtggatggctggcagca 320
Query: 121 ggcagaagccagagttactcacaaacatcatgtattattttatataagataatttatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcagaagccagagttactcacaaacatcatgtattattttatataagataatttatttt 380
Query: 181 tttccctctttggaataagttctgtgagttattatataatgctccccccccccatacaca 240
|| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 381 tt-ccctctttggaataagttctgtgagttattatataatgcttccccccc--atacaca 437
Query: 241 cacacaataatatagtgcttctcatttgaaccacacgttgactgatctgcagtgttagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cacacaataatatagtgcttctcatttgaaccacacgttgactgatctgcagtgttagcc 497
Query: 301 tccgggagggaaggtggtggcccccatgggacattttagacacagaggcataaagggaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tccgggagggaaggtggtggcccccatgggacattttagacacagaggcataaagggaaa 557
Query: 361 gcatttctagtgaagttgcaggcaaactggtaatgctccagtcaaaagtgccaagagaga 420
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 558 gcatctctagtgaagttgcaggcaaactggtaatgctccagtcaaaagtggcaagagaga 617
Query: 421 gaaaccatcctcagctggaagggagagagccaaggtcctggaaag 465
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gaaaccatcctcagctggaagggagagagccaaggtcctggaaag 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
