Query= MSMg01no452_h10.b1 MSMg01no452_h10.b1 CHROMAT_FILE:
MSMg01no452_h10.b1 PHD_FILE: MSMg01no452_h10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:01 2005
(682 letters)
>mm_chr1_31662648_31663729
Length = 1082
Score = 1297 bits (671), Expect = 0.0
Identities = 677/679 (99%)
Strand = Plus / Plus
Query: 4 ggaattctatagtttctccagcaaaacttttattttgacatatttccaccagggggcact 63
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 204 ggaattctatagtttctccagcaaaacttttattttgacatatttccaccggggggcact 263
Query: 64 ttcctcatgtggtgtgaaaattaaaaccttctctgttatatttgtgataaaaaattgtct 123
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 264 ttcctcatgtggtgtgaaaattaaaaccttctctgtaatatttgtgataaaaaattgtct 323
Query: 124 gtaaataatctatttgtaaatttgaaggtttagccttgtctaaaaagacaatacatttcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtaaataatctatttgtaaatttgaaggtttagccttgtctaaaaagacaatacatttcc 383
Query: 184 accatatttactataatgatattgtattgaaatcatcaataaaatcaattgggtctaagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 accatatttactataatgatattgtattgaaatcatcaataaaatcaattgggtctaagt 443
Query: 244 atcaattcactatcttctgaaattaaaattccaatcatttgatttgtactttataagcta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atcaattcactatcttctgaaattaaaattccaatcatttgatttgtactttataagcta 503
Query: 304 catttaaatgattgttacaaaaagattatgaatcctagttaaactgataacttagaaatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 catttaaatgattgttacaaaaagattatgaatcctagttaaactgataacttagaaatt 563
Query: 364 tttattgagaaagtcaacatgaaaataaattctattctttttgtagtttctttcagcacc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttattgagaaagtcaacatgaaaataaattctattctttttgtagtttctttcagcacc 623
Query: 424 ttctttcttcacatgttattaacactaccaacaaaatgctgattttataggatgacttat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttctttcttcacatgttattaacactaccaacaaaatgctgattttataggatgacttat 683
Query: 484 tttatagttataagaattaaccacttatttactgtatgaaaatatatgtaatatgtataa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tttatagttataagaattaaccacttatttactgtatgaaaatatatgtaatatgtataa 743
Query: 544 atattcaaatatatgtaaaatatgtttgcattttatgcaaatatatgtaaatatatgtta 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atattcaaatatatgtaaaatatgtttgcattttatgcaaatatatgtaaatatatgtta 803
Query: 604 gtatatgtgacttaaaaatcactagtttcagttttaattttttcaatttatacttggttt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gtatatgtgacttaaaaatcactagtttcagttttaattttttcaatttatacttggttt 863
Query: 664 tatatttgatatctacagg 682
|||||||||||||||||||
Sbjct: 864 tatatttgatatctacagg 882
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space: 720384
Effective search space used: 720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_h10.g1 MSMg01no452_h10.g1 CHROMAT_FILE:
MSMg01no452_h10.g1 PHD_FILE: MSMg01no452_h10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:01 2005
(585 letters)
>mm_chr1_31849740_31850724
Length = 985
Score = 1021 bits (528), Expect = 0.0
Identities = 544/554 (98%), Gaps = 8/554 (1%)
Strand = Plus / Minus
Query: 40 aaataaaaaacaaaacaaaacaaatcacagataaaggaagacaagagtaaatattttgct 99
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 aaataaaaaacaaaacaaaacaaatcacagataaaggaagacaagagtaaatattttgct 926
Query: 100 ttttcttgtttctcacaaaacattatgaagtaaataatattaaaataatgctcagaaaac 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 ttttcttgtttctcacaaaacattatgaagtaaataatattaaaataatgctcagaaaac 866
Query: 160 tccagcagatagtattcttcaagcat--------acacacacacacacacacacaaatat 211
|||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 865 tccagcagatagtattcttcaagcatacacatacacacacacacacacacacacaaatat 806
Query: 212 atacatacatgcatacatactatcaacaataattagaataattcatgccactttattgaa 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 atacatacatgcatacatactatcaacaataattagaataattcatgccactttattgaa 746
Query: 272 atttaatatttatgtatcatatatacatatatatgcatgcaaattagaatataacctata 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atttaatatttatgtatcatatatacatatatatgcatgcaaattagaatataacctata 686
Query: 332 gattgcatagtgatctttgcatcacttttaaatcaatatgattgactgcctaagtgaatt 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gattgcatagtgatctttgcatcacttttaaatcaatatgattgactgcctaagtgaatt 626
Query: 392 aaaactttctctagctaacaatatgtaaaatgattcgtggatttgaagagattaaaaata 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaaactttctctagctaacaatatgtaaaatgattcgtggatttgaagagattaaaaata 566
Query: 452 aatttacttgtcaacaaatgtttgataagatcaagacttttagaaattaagaaagggact 511
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 565 aatttacttgtcaacaaatgtttgataagatcaagactgttagaaattaagaaagggact 506
Query: 512 attgaacaaatgaaataaaatttcacatgaatcattttgctaaattatatatgtgtgtgt 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 attgaacaaatgaaataaaatttcacatgaatcattttgctaaattatatatgtgtgtgt 446
Query: 572 gtatgcgtgtgtgc 585
|||||| |||||||
Sbjct: 445 gtatgcatgtgtgc 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
