TTTTTCACCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTCAACTGTATGATACTGAATGGCTGAGAGGCACCTGAA
AAATGTTCAATATCCTTAAATCTTCAGAGAAATGCAAGTCAAAATAACCC
TGAGATTCCACCTCACACCAATCAGAATGGCTAAGATAAAAAATTCAGGT
GACAATAGATGCTGGTGAGGATGTGGTGAAAGAAGAACACTCCTCCATTG
CTGGTGGGATTGCAAGCTTGTACAACCACTGTAGAAATCAGTCTGGCAGT
TCCTCAGAAAATTGGACATAGCACTACCGGAAGATCCAGCAATACCTCTC
CTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGCCC
AACTAGGTTCTTTGCAGCCTTATTTATAATATCCAGAAGCTGGAAAGAAC
CCAGATGTCCATCAACAGAGGAATGGATACTGAAAATATGGTATGGTATA
TTTACACAATGGAGCTATTAAAACAATGAATTTATGAAATTCTTAGGCCA
AAGGATTTATCTGGAGGATACCATCCTGAGTGAGGTAACCCAATCACAAA
AGAACTCACATGATATACATTCACTGATAAGTGGATATTAGCCTAGAAAT
ATAGAATACGCAAGATACAATTTGCAGAANACATGTAACTCAAGAAGAAA
GAAGACCAAAGTGTGGATACTTTCTTCCTTCTTAGAATGGGGAATACCTA
TGGAGGGAGTTACAGAGAN

NCCCCCCGAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAGTTTCTGCTGAGAGT
AGAAGAGACTTTCCATCATAAATAATGTAATTAATGTACTTGTATACTGA
GTTTTAATGTATTAGAAACATAATTGGAAAACCTGATCTTTGTATTGTAA
TATATTAATGTAAAAAATAGCATTGAGATTTCTTTTAGAGGACAGAGATA
CACAGGGATTCATTTTAAATTCCAGAACCAATAATCAATAAATTGTCATT
CTTTTCTAAAACTCCTCTTTATAAATTCTATGACAGCTTTAAAATTTGTG
TAGTTGAACTTCATTCATTCCATTAATGTTGAGGTTTGCAAACACAAAAT
GAAACATTATAAGCTAATACACACAACTATCCAGATACTTTGCCCAGATA
TAATGCCATTTGTACTGAAAAGTACCATACTGTACAGGCCAAATGGAGGA
TGAAACCTAAACCCACAAGCTTCATATTTTACCCAATACAATGCATGAAG
CCTTGTCTAGAGAAATGAGAAGGAAATTGAAAAGCATATGAATAGAAAAA
CAAAAGCAATTTTATCTGAAAATAATAAGATTCTGTATAAATGACCTAAA
GACTGAACCATTACACTTATAGAAAAATCTATCATTATAGGTTTAATATT
TTGAGTATATTTACAATACTTTTTCCTATGTACNAATAAGAAATATTCTC
ATGTAACAACTTCAT

Query= MSMg01no453_h08.g1 MSMg01no453_h08.g1 CHROMAT_FILE:
MSMg01no453_h08.g1 PHD_FILE: MSMg01no453_h08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:20 2005
         (607 letters)



>mm_chr1_150278716_150279722
          Length = 1007

 Score = 1106 bits (572), Expect = 0.0
 Identities = 599/608 (98%), Gaps = 2/608 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttagtttctgctgagagtagaagagactttccatcataaataatgtaattaatgtacttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagtttctgctgagagtagaagagactttccatcataaataatgtaattaatgtacttg 260

                                                                       
Query: 61  tatactgagttttaatgtattagaaacataattggaaaacctgatctttgtattgtaata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 tatactgagttttaatgtattagaaacataattggaaaacctgatctttgtgttgtaata 320

                                                                       
Query: 121 tattaatgtaaaaaatagcattgagatttcttttagaggacagagatacacagggattca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 tattaatgtaaaaaatagcattgagatttcttttagaggacagagatacacagtgattca 380

                                                                       
Query: 181 ttttaaattccagaaccaataatcaataaattgtcattcttttctaaaactcctctttat 240
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttaaattccagaaacaataatcaataaattgtcattcttttctaaaactcctctttat 440

                                                                       
Query: 241 aaattctatgacagctttaaaatttgtgtagttgaacttcattcattccattaatgttga 300
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaattctatgaaagctttaaaatttgtgtagttgaacttcattcattccattaatgttga 500

                                                                       
Query: 301 ggtttgcaaaca-caaaatgaaacattataagctaatacacacaactatccagatacttt 359
           |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtttgcaaacatcaaa-tgaaacattataagctaatacacacaactatccagatacttt 559

                                                                       
Query: 360 gcccagatataatgccatttgtactgaaaagtaccatactgtacaggccaaatggaggat 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gcccagatataatgccatttgtactgaaaagtaccatactgtacaggccaaatggaggat 619

                                                                       
Query: 420 gaaacctaaacccacaagcttcatattttacccaatacaatgcatgaagccttgtctaga 479
           ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 620 gaaacctaaacccgcaagcttcatattttacccaatgcaatgcatgaagccttgtctaga 679

                                                                       
Query: 480 gaaatgagaaggaaattgaaaagcatatgaatagaaaaacaaaagcaattttatctgaaa 539
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaaatgagaaggaaattaaaaagcatatgaatagaaaaacaaaagcaattttatctgaaa 739

                                                                       
Query: 540 ataataagattctgtataaatgacctaaagactgaaccattacacttatagaaaaatcta 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ataataagattctgtataaatgacctaaagactgaaccattacacttatagaaaaatcta 799

                   
Query: 600 tcattata 607
           ||||||||
Sbjct: 800 tcattata 807


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space:   595209
Effective search space used:   595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)