NNNACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTATAAAGTGTGTAGCAGTGAATTAGTTAAAATGCTTTGGTT
CCCCGCAGGTTGCACATGTGCTGCAGCCACCAAAGAGCTCTCTGGATTTG
TAAATGAAAGACACACACACACACACACACACACACACACACACACACAC
ACACACACACACTCATATGAGCTACGTAATTGATATGCCTTGACTAGTTC
AATGACTGGGCACTTCTAAATCTCCCTGAGGCTAGCAAACACCCCCCTCC
AGTATTCCTGAGTTAACATCTTTTAAAATCGAAATTTCATCTGTGTACTT
CAGACCCAATCCAGGAAAGTGGCCCTATATTCTTCCATCTCAGTGGGTCT
TTAAGTTTCATCTATCTGCTTTCCCAATATGGTCATGGTGATTCTCTGTC
TCTCCCCTCTCCCTTGGTCTCTTGCCTGCTCACTCTAAAAATCCTGCCTT
GTCTCCCTGCCCAGCCATTGGCTGTCTGGCAAGCTTTATTATCAGTTGAA
GCCAGCTGGGGGCAGGGACCCTCAGGTCTGGAAGCCCAACTTTTGGGAGC
CAAAATAAGACAAAGCATTAGAACCAATTCCCAACAAAAGTATTTGAGAT
TTACATATCTCTCTTAGAAAAGTGTTAAGNTATATTTTCTTTCTTTCTTT
TTTAAATATTTCTCTTTTATTAAACATAGTTTCTTATCTTATATAGTTTA
TCCTGATTACAGTN

NCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGACATGACTACATGACTTT
GGAAGGAGACAATGTTGCAGCCCTAAATGCCCCAGAGCTGCACAGCCAGC
TGAGCTGCTTCTGCACCACATATATGTTGAAACTATGAGAAGCTGCATGA
CTATCTTCAGCCAACATGCTTTCAAACCTGTTATGCAACAATGAGGAATA
AAAGAGAAGAGAGTCACATCAATGCCCAGATTGCAAGGTTTATCTGATAG
TCACTACTGGTCTCTAGGATTAGGTGAAAACATGTGTTTGTAGATAATTA
CTTTTCTAACCACAATAGAGAAGACTCAGTATTGACACACCACATAAAAA
TATGTTCTTCACATAAAAATCACCCAAAACCTAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAAGGAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGNNNNNNNNG
NNGGGGGGGNGGGGNGGGGGNGGGGGGGGGGGGGGNGGGGGGGNGGGGN

Query= MSMg01no453_l10.g1 MSMg01no453_l10.g1 CHROMAT_FILE:
MSMg01no453_l10.g1 PHD_FILE: MSMg01no453_l10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:40 2005
         (502 letters)



>mm_chr1_8837687_8838588
          Length = 902

 Score =  884 bits (457), Expect = 0.0
 Identities = 498/521 (95%), Gaps = 20/521 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgacatgactacatgactttggaaggagacaatgttgcagccctaaatgccccagagctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgacatgactacatgactttggaaggagacaatgttgcagccctaaatgccccagagctg 260

                                                                       
Query: 61  cacagccagctgagctgcttctgcaccacatatatgttgaaactatgagaagctgcatga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacagccagctgagctgcttctgcaccacatatatgttgaaactatgagaagctgcatga 320

                                                                       
Query: 121 ctatcttcagccaacatgctttcaaacctgttatgcaacaatgaggaataaaagagaaga 180
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctatctttagccaacatgctttcaaacctgttatgcaacaatgaggaataaaagagaaga 380

                                                                       
Query: 181 gagtcacatcaatgcccagattgcaaggtttatctgatagtcactactggtctctaggat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagtcacatcaatgcccagattgcaaggtttatctgatagtcactactggtctctaggat 440

                                                                       
Query: 241 taggtgaaaacatgtgtttgtagataattacttttctaaccacaatagagaagactcagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taggtgaaaacatgtgtttgtagataattacttttctaaccacaatagagaagactcagt 500

                                                                       
Query: 301 attgacacaccacataaaaatatgttcttcacataaaaatcacccaaaacctagagagag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 attgacacaccacataaaaatatgttcttcacataaaaatcacccaaaacctagaaagag 560

                                                                       
Query: 361 agagagagagagagagagagagagaga--ga-ga-ga-ga-gaag--------------g 400
           |||||||||||||||||||||||||||  || || || || ||||              |
Sbjct: 561 agagagagagagagagagagagagagaaggaagaagaagaagaagaagaagaagaagaag 620

                                                                       
Query: 401 aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag 460
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag 680

                                                    
Query: 461 aagaagaaggaggaggaggaggaggaggaggaggaggagga 501
           |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 681 aagaagaaggaggaggagcaggaggaggaggaggaggagga 721


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 141
Number of extensions: 52
Number of successful extensions: 52
Number of sequences better than 10.0: 1
Number of HSP's gapped: 42
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space:   438864
Effective search space used:   438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)