NNAAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTATCAGATCTTCAAAGAAGATCTAATCACAGTTCTTCACA
AACTATTCCACAAAATAGAAACAGAGGTATTCTACCCAACTCATTCTATG
AAGCCACAATTACTCTGGTACCTAAACCACAAAAAGACCCAACAAAGATA
GAGAACTTCAGACCAATTTCCCTTATGAATATCGATGCAAAAATCCTCAA
TAAAGTTCTCACTAACTGAATCCAAGAACACATCAAAACAATCATCCATC
CTGACCAAGTAGGTTTCATCTCAGGGATGCAGGGATGGTTCAATATTTGG
AAATCCATCAACATAATCCAGTGTATAAACAAACTCAAAGACAAAAACCA
CATGATCATCTCATTAGATGTGGAGAAAGAATTTGACAAAATCCATCACC
TCTTCATGATAAAAGTTTTGAAAAGATCAGCAATTCAAGGCCCATGCCTA
AAAATGATAAAAGCAATCTACAGCAAACCAGTAGACAACATCAAAGTAAA
TGGTGAGAAGCTGGAAGCAATCCCACTAAAATCAGGGACTAGACAAGGCT
GTCCACTCTCTCCTTACCTATTCAACATTGTACTTGAAGTCCTAGCCAGA
GCAATTTGACAACACAAGGACATCAAGGGGATACAAATTGGAAAGGAAGA
AGTCAAAATATCACTTTTTGCAGATGATATGATAGTATATATAAGTGACC
CTAAAAATTCN

TCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTAACAGTATGTTTTATGAT
AGAGGTATAGCTCATGAGGTAGAGTGCTTGCTTAGTGCCAAAAATAAACC
GGAAAGCCCTCACCTATTTTAGATTACACAATACCAGGACTCACTTGATT
CAGAAGTTGAATGCATTCAAATTTGTTTATGACTCATTAGATGAGTTATA
GTGAAATCAGGAATATGTAAGCATTTGGAACAACTCACAGGACATGGGCT
AAGTATAAACGTATGTACGTGTTTATACTGGCTTTGTATGTAAGAAGAGG
AAAGCATAAGAGGGAAATCAGTAGCAAATTGGTAAAAGATAGCGATGAGA
GAAACAGAGCCAAGCAGTCCGAGAGCCTCTGAGGTCACTGCAATGGCTCT
CACATCTGCTTCTGTCTGCTCCTGGCCCGAGCGAACTGTGTGCAGTGCAG
CCTTTGGTTTCACAGGCGCCGCTCAGTGTTTGTCGCTGTTGTTTTCAAAT
GTGAGGGTTTCTAATAGGACTGTTAAGAGGCTTCTGGGCAAAAGGATACC
AGAAAAGATGATGAGATAATCTAGGATGATGTACTAAATTAACAAATTTG
ATTATTCATACAACAAACTCTTAAGATGTGTGAAAAGCATATAAGCATCA
AATATTTTGAGATAGCTATCTTTTTTTTTTACCTTCTGTTATTGTTCAGA
TGAATATTTCCATT

Query= MSMg01no453_p10.g1 MSMg01no453_p10.g1 CHROMAT_FILE:
MSMg01no453_p10.g1 PHD_FILE: MSMg01no453_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:00 2005
         (655 letters)



>mm_chr1_53819983_53821040
          Length = 1058

 Score = 1195 bits (618), Expect = 0.0
 Identities = 644/654 (98%), Gaps = 3/654 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttaacagtatgttttatgatagaggtatagctcatgaggtagagtgcttgcttagtgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 tttaacagtatgttttatgatagaggtatagctcatgaggtagagtgcttgcttagtgcc 795

                                                                       
Query: 61  aaaaataaaccggaaagccctcacctattttagattacacaataccaggactcacttgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 aaaaataaaccggaaagccctcacctattttagattacacaataccaggactcacttgat 735

                                                                       
Query: 121 tcagaagttgaatgcattcaaatttgtttatgactcattagatgagttatagtgaaatca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tcagaagttgaatgcattcaaatttgtttatgactcattagatgagttatagtgaaatca 675

                                                                       
Query: 181 ggaatatgtaagcatttggaacaactcacaggacatgggctaagtataaacgtatgtacg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ggaatatgtaagcatttggaacaactcacaggacatgggctaagtataaacgtatgtacg 615

                                                                       
Query: 241 tgtttatactggctttgtatgta---agaagaggaaagcataagagggaaatcagtagca 297
           |||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||
Sbjct: 614 tgtttatactggctttgtatgtaaggagaagaggaaagcataagagggaaatcagtagca 555

                                                                       
Query: 298 aattggtaaaagatagcgatgagagaaacagagccaagcagtccgagagcctctgaggtc 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aattggtaaaagatagcgatgagagaaacagagccaagcagtccgagagcctctgaggtc 495

                                                                       
Query: 358 actgcaatggctctcacatctgcttctgtctgctcctggcccgagcgaactgtgtgcagt 417
            ||||||||||||| |||||||||||||||||||||||||| |||||| |||||| ||||
Sbjct: 494 gctgcaatggctcttacatctgcttctgtctgctcctggccagagcgagctgtgtacagt 435

                                                                       
Query: 418 gcagcctttggtttcacaggcgccgctcagtgtttgtcgctgttgttttcaaatgtgagg 477
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gcagcctttggtttcacaggggccgctcagtgtttgtcgctgttgttttcaaatgtgagg 375

                                                                       
Query: 478 gtttctaataggactgttaagaggcttctgggcaaaaggataccagaaaagatgatgaga 537
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 374 gtttctaataggactgttaagaggcttctgggcaaaaagataccagaaaagatgatgaga 315

                                                                       
Query: 538 taatctaggatgatgtactaaattaacaaatttgattattcatacaacaaactcttaaga 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 taatctaggatgatgtactaaattaacaaatttgattattcatacaacaaactcttaaga 255

                                                                 
Query: 598 tgtgtgaaaagcatataagcatcaaatattttgagatagctatctttttttttt 651
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tgtgtgaaaagcatataagcatcaaatattttgagatagctatctttttttttt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1058
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1048
Effective search space:   675960
Effective search space used:   675960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)