Query= MSMg01no455_e06.b1 MSMg01no455_e06.b1 CHROMAT_FILE:
MSMg01no455_e06.b1 PHD_FILE: MSMg01no455_e06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:43 2005
(516 letters)
>mm_chr1_140599248_140600163
Length = 916
Score = 951 bits (492), Expect = 0.0
Identities = 510/516 (98%)
Strand = Plus / Minus
Query: 1 ccatcaacttctttttgcggaagctgcctctgcgctagtgctcttcagggcccctctgga 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 545 ccatcaacttctttttgcggaagctgcctctgcgctagtgctcttcaggacccctctgga 486
Query: 61 aagaataatactatgggtttaggagaaaacttttcttgactattttccgctacagacatg 120
||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 485 aagaataatgctatgggtttaggagaaaacttttcttgacttttttccactacagacatg 426
Query: 121 aacttttctggccccctacctctttcccatgcctcttctgtcttcactccttgaaaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aacttttctggccccctacctctttcccatgcctcttctgtcttcactccttgaaaaata 366
Query: 181 tttttagactttgatggtagcctctgagcgagcagaggtgacagcatgtctccagcctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tttttagactttgatggtagcctctgagcgagcagaggtgacagcatgtctccagcctgc 306
Query: 241 cttcctaaacctggagcccttagccatgttttagaaggaaaccattcaaatagaataaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cttcctaaacctggagcccttagccatgttttagaaggaaaccattcaaatagaataaag 246
Query: 301 gagcaagcacacctcaaagattcccaataataatttaaacagagtacagacatataaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gagcaagcacacctcaaagattcccaataataatttaaacagagtacagacatataaaag 186
Query: 361 tgttcaaatataaatatacaggtaaatgaatttttgtagagcaaataatagccttgtgac 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 185 tgttcaaatataaatatacaggtcaatgaatttttgtagagcaaataatagccttgtgac 126
Query: 421 tagatcaagaaatgtaatcttgccagggtattacagttttgttgagagaaaaagagagaa 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 125 tagatcaagaaatgtaatcttgccagggtgttacagttttgttgagagaaaaagagagaa 66
Query: 481 aaggagaaggtgtgggagggagggatggaaagagag 516
||||||||||||||||||||||||||||||||||||
Sbjct: 65 aaggagaaggtgtgggagggagggatggaaagagag 30
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_e06.g1 MSMg01no455_e06.g1 CHROMAT_FILE:
MSMg01no455_e06.g1 PHD_FILE: MSMg01no455_e06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:43 2005
(588 letters)
>mm_chr1_140420998_140421985
Length = 988
Score = 1067 bits (552), Expect = 0.0
Identities = 577/590 (97%), Gaps = 8/590 (1%)
Strand = Plus / Plus
Query: 1 agtctctgctcaagagagcattaagtctcaggcaataccaataaaagaatcacaatggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtctctgctcaagagagcattaagtctcaggcaataccaataaaagaatcacaatggga 260
Query: 61 ttgtattactacatgctacagaaggactgcaccccataaaattaaatgtgttatgtccga 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 ttgtattactacatgctacagaaggactgcaccccatgaaattaaatgtgttatgtccga 320
Query: 121 agaacttttacagaaaagcacctttgaggtcaaaggaaaaggcttaaggaagtggtgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaacttttacagaaaagcacctttgaggtcaaaggaaaaggcttaaggaagtggtgtgt 380
Query: 181 cagtgaagagctcaaggataaagagacagaaacttgaccgggaatgaagaagggcatcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtgaagagctcaaggataaagagacagaaacttgaccgggaatgaagaagggcatcca 440
Query: 241 gggcagaagaaaatgcacacatgaaagagaccaaggacaaaacactaagagacagtcaag 300
||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 441 gggcagaagaaaatgcacacacgaaagagaccaaggacaaaacactaagag----tcaag 496
Query: 301 gaacggacgg----tccttgtgcagagcattcggggaaagcagattctaccccagacatt 356
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gaacggacggacggtccttgtgcagagcattcggggaaagcagattctaccccagacatt 556
Query: 357 tactaagtgaccaccctaggtcaggcaccgctctaggatatggccggtgaccatgcagac 416
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 557 tactaagtgaccaccctaggtcaggcaccgctctaggatatggacggtgaccatgcagac 616
Query: 417 tgagattcctcccctgggaagctcatctccctaaccacacaggctaccaaacattcatcc 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tgagattcctcccctgggaagctcatctccctaaccacacaggctaccaaacattcatcc 676
Query: 477 tcattaagaaatccttgaaggatctgattgaaaacagagagttttcttattcttctctgc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tcattaagaaatccttgaaggatctgattgaaaacagagagttttcttattcttctctgc 736
Query: 537 cacctanagactgattaagaaatatagatatacngagtagatcctggggg 586
|||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 737 cacctaaagactgattaagaaatatagatatacagagtagatcctggggg 786
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
