Query= MSMg01no455_e14.b1 MSMg01no455_e14.b1 CHROMAT_FILE:
MSMg01no455_e14.b1 PHD_FILE: MSMg01no455_e14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:45 2005
(484 letters)
>mm_chr1_76032042_76032925
Length = 884
Score = 899 bits (465), Expect = 0.0
Identities = 477/481 (99%)
Strand = Plus / Minus
Query: 1 gaccttagttatcagatttctaaagagaggggtacggggctctaaactggaaacacctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaccttagttatcagatttctaaagagaggggtacggggctctaaactggaaacacctgg 422
Query: 61 cttcccttgatacacccagcaagtatttgctgagtatccactacttgacaggcagcaggc 120
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 421 cttcccttgatacacccagcaagtatttactgagtattcactacttgacaggcagcaggc 362
Query: 121 aaaggagactataatacactcatcttcaacatgtattgacctagcagtataagggacaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaaggagactataatacactcatcttcaacatgtattgacctagcagtataagggacaag 302
Query: 181 taagacttattgacaattatggacaaagactaccaaattttggccagcattggtagagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taagacttattgacaattatggacaaagactaccaaattttggccagcattggtagagtg 242
Query: 241 ctttcaaggtaagggaccagacctagtaaggccatacgatagtctttctaagaaaatgac 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 241 ctttcaaggtaagggaccagacctagtaaggccatacgatagtctgtctaagaaaatgac 182
Query: 301 atttcaagaaacttgaagatgaggaattggatgtacaaagagctaaggaaagaaagcctc 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 181 atttcaagaaacttgaagatgaggagttggatgtacaaagagctaaggaaagaaagcctc 122
Query: 361 tggcaaagttcactgtaggtagagccctgaagcctgagaggctaagtacatctggagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggcaaagttcactgtaggtagagccctgaagcctgagaggctaagtacatctggagaag 62
Query: 421 accagtagggctgtcatcattggaaaagagggagcggatgtcatcaggactcagaggtct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 accagtagggctgtcatcattggaaaagagggagcggatgtcatcaggactcagaggtct 2
Query: 481 g 481
|
Sbjct: 1 g 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_e14.g1 MSMg01no455_e14.g1 CHROMAT_FILE:
MSMg01no455_e14.g1 PHD_FILE: MSMg01no455_e14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:45 2005
(452 letters)
>mm_chr1_75873521_75874371
Length = 851
Score = 843 bits (436), Expect = 0.0
Identities = 448/452 (99%), Gaps = 1/452 (0%)
Strand = Plus / Plus
Query: 1 acttgcactgttgactccagggtgtctgcaatcacaagcggacaccagcaagtgactgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttgcactgttgactccagggtgtctgcaatcacaagcggacaccagcaagtgactgta 260
Query: 61 cagcaatttcagtgtcatccttgagtcagaatttccctgctgtgtctgtctggcccatca 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagccatttcagtgtcatccttgagtcagaatttccctgctgtgtctgtctggcccatca 320
Query: 121 ggctatgtccctccatgtaagagagcaagagtcacccactagagagaggtgaggtagaga 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 ggctatgtccctccatgtaagagagca-gagtcacccactagagagaggtgaggtagaga 379
Query: 181 cactcttgttttgagcatattctctgagttttatggctggctttcagcgtagttatgtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cactcttgttttgagcatattctctgagttttatggctggctttcagcgtagttatgtaa 439
Query: 241 tctctatgcaaatgccatctgccatgtttggcacttgcaataaaatatttaagatatttt 300
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tccccatgcaaatgccatctgccatgtttggcacttgcaataaaatatttaagatatttt 499
Query: 301 attcatcctgcttgagaaacagattttcagaaatcagatctctcctttcccgagagcaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 attcatcctgcttgagaaacagattttcagaaatcagatctctcctttcccgagagcaca 559
Query: 361 gctctatagagactgcatatgaattcttccacgcacgactgcagttcctatttttagcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gctctatagagactgcatatgaattcttccacgcacgactgcagttcctatttttagcca 619
Query: 421 gggtttgggctataaacttgaaagttttcgag 452
||||||||||||||||||||||||||||||||
Sbjct: 620 gggtttgggctataaacttgaaagttttcgag 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 851
Length adjustment: 10
Effective length of query: 442
Effective length of database: 841
Effective search space: 371722
Effective search space used: 371722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
