Query= MSMg01no455_g15.b1 MSMg01no455_g15.b1 CHROMAT_FILE:
MSMg01no455_g15.b1 PHD_FILE: MSMg01no455_g15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:55 2005
(685 letters)
>mm_chr1_41171127_41172211
Length = 1085
Score = 1280 bits (662), Expect = 0.0
Identities = 674/678 (99%), Gaps = 2/678 (0%)
Strand = Plus / Plus
Query: 8 gaattccttcttac-taaaacaaaatacacataactgagtgtccaaaaagattctgtaat 66
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattccttc-gacataaaacaaaatacacataactgagtgtccaaaaagattctgtaat 266
Query: 67 ctgaaaccatgagtctttcccatctcactggctgcatacagctaaaagctatgtttttac 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ctgaaaccatgagtctttcccatctcactggctgcatacagctaaaagctatgtttttac 326
Query: 127 ttcagtcttcattcttaatcatgaatactgtgaattgctttcgtttcatgagaaatgggg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttcagtcttcattcttaatcatgaatactgtgaattgctttcgtttcatgagaaatgggg 386
Query: 187 ggaccgaaggcccctatatggattggatgttgtcaatatgtgatttcttttgaaaacata 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ggaccgaaggcccctatatggattggatgttgtcaatatgtgatttcttttgaaaacata 446
Query: 247 tatttgtttttaaaagaatcattcttaagaaatttacatatccctgtacttagcactgtg 306
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 catttgtttttaaaagaatcattcttaagaaatttacatatccctgtacttagcactgtg 506
Query: 307 cattttgcatcctacataatactgtgtgggtgtgtgataatgaaagtacatttctaaaaa 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cattttgcatcctacataatactgtgtgggtgtgtgataatgaaagtacatttctaaaaa 566
Query: 367 acaaaacaaaaccaggaaaacaacttaagtgctctagtgcacttgtgcacatttcccttg 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 acaaaacaaaaccaggaaaacaacttaagtgctctagtgcacttgtgcacatttcccttg 626
Query: 427 tatatacagttcttttcaaggagttaaaaagccattgtgattctaatgattattttacat 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tatatacagttcttttcaaggagttaaaaagccattgtgattctaatgattattttacat 686
Query: 487 ttaagcacacaggggaccttgacagattctacgtaaacatgcttataccctgaaatttga 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ttaagcacacaggggaccttgacagattctacgtaaacatgcttataccctgaaatttga 746
Query: 547 aataacctacttaggcaaaaagtatcttgaatgctaccagggctctctctctgtttttcc 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 aataacctacttaggcaaaaagtatcttgaatgctaccagggctctctctctgtttttcc 806
Query: 607 atcttggggataatgctaagatcagatcttatctctgagagagcaaccctgtactttgtc 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 atcttggggataatgctaagatcagatcttatctctgagagagcaaccctgtactttgtc 866
Query: 667 attataattagaaataag 684
||||||||||||||||||
Sbjct: 867 attataattagaaataag 884
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space: 725625
Effective search space used: 725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_g15.g1 MSMg01no455_g15.g1 CHROMAT_FILE:
MSMg01no455_g15.g1 PHD_FILE: MSMg01no455_g15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:55 2005
(613 letters)
>mm_chr1_41308503_41309520
Length = 1018
Score = 1085 bits (561), Expect = 0.0
Identities = 601/617 (97%), Gaps = 7/617 (1%)
Strand = Plus / Minus
Query: 1 ctactgttctttcaaagaagaatggtttactttccagtgcatggtggctcacagtcctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 ctactgttctttcaaagaagaatggtttactttccagtgcatggtggctcacagtcctct 927
Query: 61 ataacttcagttgaggtgtctgacattctcttctgaactctacaggcactggcaat-aat 119
||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||
Sbjct: 926 ataacttcagttgaggtgtatgacattctcttctgaactctacaggcactggc-atgaat 868
Query: 120 gtgtaccacacacattcgtacagccaaacacacatatgcatgaaataagaaattttaaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 gtgtaccacacacattcgtacagccaaacacacatatgcatgaaataagaaattttaaaa 808
Query: 180 cctacttcttaaagaaaattatacaggtatgagtttaatctagaaggataaagggtggag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 cctacttcttaaagaaaattatacaggtatgagtttaatctagaaggataaagggtggag 748
Query: 240 actcagtactgaatgtgggagaatgcttgcttttgaagccttggttctatctgattgact 299
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 747 actcagtactgaatgtgggagaatgcttgcttttgaagtcttggttctatctgattgact 688
Query: 300 ataaacagaaagaaatgaagacagacaagaatatgaataatgtgtagtatagaatagcaa 359
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ataaacagaaaaaaatgaagacagacaagaatatgaataatgtgtagtatagaatagcaa 628
Query: 360 gtttcaaaaaaaaaaaaaa-----gaacaatcaagatttctgaaaagagccatgaagcaa 414
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 627 gtttcaaaaaaaaaaaaaaaaaaagaacaatcaagatttctgaaaagagccatgaagcaa 568
Query: 415 atttctaccctacagaagaatcagagcaggctaccagagacaatagtctatgtcatgtca 474
|| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 atctctaccctatagaagaatcagagcaggctaccagagacaatagtctatgtcatgtca 508
Query: 475 tcttacatttgatatgtcaggtgcccatagttgccctatgtgaattagttaatagtggta 534
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tcttacatttaatatgtcaggtgcccatagttgccctatgtgaattagttaatagtggta 448
Query: 535 tagacacaaaaccctgtgctcaatactcttaatgaccagtaggccagtgtactgagcaac 594
||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tagacgcaaaaccctgggctcaatactcttaatgaccagtaggccagtgtactgagcaac 388
Query: 595 ctgtatcaaggaatctt 611
||||||||||||||||
Sbjct: 387 atgtatcaaggaatctt 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1018
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1008
Effective search space: 607824
Effective search space used: 607824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
