Query= MSMg01no455_h22.b1 MSMg01no455_h22.b1 CHROMAT_FILE:
MSMg01no455_h22.b1 PHD_FILE: MSMg01no455_h22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:01 2005
(449 letters)
>mm_chr1_136006703_136007552
Length = 850
Score = 632 bits (327), Expect = 0.0
Identities = 371/387 (95%), Gaps = 7/387 (1%)
Strand = Plus / Minus
Query: 66 ttttttttcccccaatttatttatttttattttgtgagcattggtttttt-gtctgcctg 124
|||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 844 tttttttt---ccaatttatttatttttattttgtgagcattggttttttggtctgcctg 788
Query: 125 cctgtctgaagatgtcagatcctctggaactggatttacagacaattgtgagctgacatg 184
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 787 cctgtctgaagatgtcagatcctctggaactggagttacagacaattgtgagctgacatg 728
Query: 185 tgggcgctgggaatcgaa-ccaggatcctctggaagaacaaacattgcccgtaaccgctg 243
|||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 727 tgggcgctgggaattgaaccca-gatcctctggaagaacaaacattgcccgtaaccactg 669
Query: 244 agctaactctccagcccctaactgctgcta-ttttgttttaaagcttgctacaagccata 302
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 668 agctaactctccagcccctaactgctgctattttttttttaaagcttgctacaagccata 609
Query: 303 tgttgctacatcctaagtatgccacctcatccagctcacggttaccatatctcttgacta 362
||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 608 tgttgctacgtcctgagtatgccaccccatccagctcacggttaccatatctcttgacta 549
Query: 363 cagcaagaggccaggcagggtggctgacaggcagggcagctgactgacatcacctaggcg 422
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 548 cagcaagaggccaggcagggtagctgacaggcagggcagctgactgacatcatctaggcg 489
Query: 423 tgagtaggcacacactattgtttgctc 449
|||||||||||||||||||||||||||
Sbjct: 488 tgagtaggcacacactattgtttgctc 462
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 850
Length adjustment: 10
Effective length of query: 439
Effective length of database: 840
Effective search space: 368760
Effective search space used: 368760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_h22.g1 MSMg01no455_h22.g1 CHROMAT_FILE:
MSMg01no455_h22.g1 PHD_FILE: MSMg01no455_h22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:01 2005
(437 letters)
>mm_chr1_135805515_135806351
Length = 837
Score = 822 bits (425), Expect = 0.0
Identities = 434/437 (99%)
Strand = Plus / Plus
Query: 1 tgcatacaccccaccctcttatcaagaaattaattccccaatggcatggggtatgcatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcatacaccccaccctcttatcaagaaattaattccccaatggcatggggtatgcatcc 260
Query: 61 tccagctttgaattccttcctggggcctgcctggcacacaccaggcaggtagggctggct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccagctttgaattccttcctggggcctgcctggcacacaccaggcaggtagggctggcc 320
Query: 121 gagggcatctgttagttttcatcctccacaagacagcctaggttaggcgggttgagaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagggcatctgttagttttcatcctccacaagacagcctaggttaggcgggttgagaatc 380
Query: 181 cccctcggtagccaaatcccctctaaagagagccctggcaactactcttgtccttttgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccctcggtagccaaatcccctctaaagagagccctggcaactactcttgtccttttgaa 440
Query: 241 cttgtgcgtggcctgtagatctttccagatgatttagtccttggctgcttgccctgggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttgtgcgtggcctgtagatctttccagatgatttagtccttggctgcttgccctgggca 500
Query: 301 cttcctgtgccccctgtatttctccaattagttagaaaagatgactcttcctgcagtgcc 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttcctgtgcaccctgtatttctccaattagttagaaaagatgactcttcctgcagtgcc 560
Query: 361 ttggtgctgcgcactgagaaaccctccacagtttgacatcggtggtttcaaagaacatgg 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 ttggtgctgcgcactgagaaaccctccacagtttgacattggtggtttcaaagaacatgg 620
Query: 421 ctgctttgatttcaagt 437
|||||||||||||||||
Sbjct: 621 ctgctttgatttcaagt 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
