Query= MSMg01no457_c08.b1 MSMg01no457_c08.b1 CHROMAT_FILE:
MSMg01no457_c08.b1 PHD_FILE: MSMg01no457_c08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:14 2005
(415 letters)
>mm_chr1_161882063_161882877
Length = 815
Score = 737 bits (381), Expect = 0.0
Identities = 408/417 (97%), Gaps = 4/417 (0%)
Strand = Plus / Plus
Query: 1 tatataatagagagaaactgtcttggacaggaaaagaaaatttaaaaaagagtaacctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatataatagagagaaactgtcttggacaggaaaagaaaatttaaaaaagagtaacctta 260
Query: 61 ataaagaagtaaaattgtaacccagaaggcatctcttacccatgatatgagcaagcaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataaagaagtaaaattgtaacccagaaggcatctcttacccatgatatgagcaagcaaga 320
Query: 121 ataatgtggacacacatctacagcctgcccaagcagaacaattctcacagggggcataaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataatgtggacacacatctacagcctgcccaagcagaacaattctcacagggggcataaa 380
Query: 181 aagtatctctgtgcgattgtctgagtcgccagctgtgctagctgtgttttctgaaataaa 240
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtaac-ctgtgcgattgtctgagtcgccagctgtgctagctgtgttttctgaaataaa 439
Query: 241 caccattttcacttggtg-ctcaaatgacaggcaaactatggtgttttagattgtttatt 299
|||||||||||||||| | | ||||||||||||||||||||||||||||||||| ||||
Sbjct: 440 caccattttcacttggaggcacaaatgacaggcaaactatggtgttttagattgggtatt 499
Query: 300 tggcagacacttcttcaaaaaaa-cgaaccaactgagcctgtcacttcaaggagaataat 358
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 500 tggcagacacttcttcaaaaaaaacgaaccaactgagcctgtcacttcaaggagaataat 559
Query: 359 caacagtatttgatttttttttcaccagtgatccaatctgagctccccggagaaaat 415
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 560 caacagtatttgatttttttttcaccagtgatccaatctgagctccccg-agaaaat 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_c08.g1 MSMg01no457_c08.g1 CHROMAT_FILE:
MSMg01no457_c08.g1 PHD_FILE: MSMg01no457_c08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:14 2005
(191 letters)
>mm_chr1_162045942_162046532
Length = 591
Score = 325 bits (168), Expect = 1e-93
Identities = 180/184 (97%)
Strand = Plus / Minus
Query: 8 aattcctgattgggaaggaacagaggagcacagtcctgacaggcctgaggccagccgtgg 67
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 391 aattcctgattgggaaggaacagaggagcacagtcctgacaggcctgaggccaggtgtgg 332
Query: 68 agtacaaggttgaagtgtgggcccagaaaggattccgggagagcaagaaagccaacaccg 127
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 331 agtacaaggttgaagtgtgggcccagaaaggagcccgggagagcaagaaagccaacaccg 272
Query: 128 aaggtcacacaggtaatgaacagcatgggttagcagtatgatggctgccaggccaagctt 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aaggtcacacaggtaatgaacagcatgggttagcagtatgatggctgccaggccaagctt 212
Query: 188 aggg 191
||||
Sbjct: 211 aggg 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 591
Length adjustment: 8
Effective length of query: 183
Effective length of database: 583
Effective search space: 106689
Effective search space used: 106689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
