NNAAATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAGCATTGTTTACCATTTTTTGTTATAAAACCTAGCTCTAT
TGTAATCCCTTATGATAGGTATCAGCAAAAGGTCCTGACAGCAAATATTG
ATGAGTGGGCTATTTTAGCCTGTATTAATGAGGGCCCATTTGATAATCAT
TATCCCAAATATCCTTTAACGACCTTTTTTAAGGAACATCCAGTCATTTT
CCCTCAAGTGGTAAGGAAAACACCCATTAAGGATGCAGTTAACATGTTTA
CTGATGGATCAAAAACTGGATGTGGATTATATGTGGTAAAGGGGAAAGAT
CCTGTGGTCAGGCAGTATTATCCCTGTACTCCGCAGATGGTGGAATTACA
AATAGTTATCGAGGTCATTAAGGATTGTGATTTTCCTTTAAATCTAATTT
CAGATTCATAATATGTAGTTAATTTAGTTTGATCCCTAGAAGTGGCTGGC
CAAATAAAAGCTCATAGTACCATCCAAGCCTTGGCCTTACAATTACAGAA
GTTGCTGTGGGAAAGATGCCCACCATTATATATTGGACATGTCCGTGCCC
ATAGTGTGCTTCCCGGACCCTTAAATAGGGGAAAAGATATTGTGGAAAAA
TTGTACTCTTATGGAGTTCATATTTTTAAGCACCCCCTATTGGATTTTAG
CTTTACAAATTGACTTCCCAATTTTTCTGCTTTTTGTTTCAN

NNTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTAAATATATTATGACTT
TCAGTTTAGTATTTTTATGGGACTCCAGAATATGTGAATTAGTGGATCTC
TGATGTTTGTGCCTTCCCACGTGCTCTTTTCCTTCAGTTGGTTTGCCTTG
TACAAACACCAATTAATGTCTTCTTTTTTATATACTATTTTTAAATTATG
TTTTATTGTTAAAAATAAAATTGAAACAAAAATTTTAAGTAAAAGAGTAT
TAATTAAAAATTGGGCACACAATTTTGTCTTATACACCATCTTAAATTTG
AAATAATATTTATTAAGTGCAATAAATTATATATATATGTATATATATAC
ATATATATATATATACATATATACACACACACACATATATATATATACAT
ACACACACACACACACACATATATATATATATATACATATATATATATAT
ATATATATATATATATACATATAATACAGTATTAAAGAACACCAAAAATA
TCTATTTAAAAAACTGAGGTTCTATGGGGATGTTAAATTTTCTTTGAATG
AAAAGCTTATAAATTTTACTTGTAAATTATCTTATAGGAAAGAGCATTCT
CTGGGATTTAAAATTCTTGTTTTTTATTTATAGCATTTTCTATTACATTT
CCTTACAATTCTTTTCNCTTCCCACTTTACTTCTTCTTCGTTATTTTACA
CTCTGTTCGT

Query= MSMg01no457_i03.g1 MSMg01no457_i03.g1 CHROMAT_FILE:
MSMg01no457_i03.g1 PHD_FILE: MSMg01no457_i03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:44 2005
         (462 letters)



>mm_chr1_149205161_149206022
          Length = 862

 Score =  679 bits (351), Expect = 0.0
 Identities = 366/373 (98%), Gaps = 5/373 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttaaatatattatgactttcagtttagtatttttatgggactccagaatatgtgaatta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tttaaatatattatgactttcagtttagtatttttatgggactccagaatatgtgaatta 615

                                                                       
Query: 61  gtggatctctgatgtttgtgccttcccacgtgctcttttccttcagttggtttgccttgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gtggatctctgatgtttgtgccttcccacgtgctcttttccttcagttggtttgccttgt 555

                                                                       
Query: 121 acaaacaccaattaatgtcttcttttttatatactatttttaaattatgttttattgtta 180
           |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 554 acaaacacaaattaatgtcttctcttttatatactatttttaaattatgttttattgtta 495

                                                                       
Query: 181 aaaataaaattgaaacaaaaattttaagtaaaagagtattaattaaaaattgggcacaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aaaataaaattgaaacaaaaattttaagtaaaagagtattaattaaaaattgggcacaca 435

                                                                       
Query: 241 attttgtcttatacaccatcttaaatttgaaataatatttattaagtgcaataaattata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 attttgtcttatacaccatcttaaatttgaaataatatttattaagtgcaataaattata 375

                                                                       
Query: 301 tatatatgtatatatatacatatatatatatatacatatata----cacacacacacata 356
           ||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||
Sbjct: 374 tatatatgtatatatatacatatatatatatatacatatatatatacacacacacacata 315

                        
Query: 357 tatatata-taca 368
           |||||||| ||||
Sbjct: 314 tatatataataca 302



 Score = 66.5 bits (34), Expect = 4e-15
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                             
Query: 297 tatatatatatgtatatatatacatatatatata 330
           ||||||||||||||||||||||||||||||||||
Sbjct: 345 tatatatatatgtatatatatacatatatatata 378


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 102
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space:   385104
Effective search space used:   385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)