Query= MSMg01no457_i09.b1 MSMg01no457_i09.b1 CHROMAT_FILE:
MSMg01no457_i09.b1 PHD_FILE: MSMg01no457_i09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:45 2005
(437 letters)
>mm_chr1_77106420_77107256
Length = 837
Score = 799 bits (413), Expect = 0.0
Identities = 431/437 (98%)
Strand = Plus / Plus
Query: 1 taaaattccctactcaaatttctaccagtctttgctttctcacatcctgtggtttctcgg 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaaattccctactcgaatttctaccagtctttgctttctcacatcctgtggtttctcgg 260
Query: 61 tgtgccttgtactgaacaactattttagctagcatggacaaaaataatactcattcattc 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgccttgtactgaacaactactttagctagcatggacaaaaataatactcattcattc 320
Query: 121 atttgtttctgcatttccatcatcagtgtgaaaaagagcaagtgcttaaatattcttgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 atttgtttctgcatttccatcatcagtgtgaaaaagagcaagtgcttaaatatccttgta 380
Query: 181 tgtatcacatgccaagaacccacatattcttcacaccataggaaaaattgcagcagggca 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtagcacatgccaagaacccacatattcttcacaccataggaaaaattgcagcagggca 440
Query: 241 gagccagtgctagttactcctgaatacctagcatgcacaggtatccagggaaggcattga 300
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 441 gagccagtgctagttactcctgaatacctagcatgcaaacgtatccagggaaggcattga 500
Query: 301 gtaactgtcaagttccttgtgaataaagaccctgagagtcatgggaagtacattctatac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtaactgtcaagttccttgtgaataaagaccctgagagtcatgggaagtacattctatac 560
Query: 361 taatagcatatatggtgcctaaaatgtgtgcagctattctgtgggctgctcaaagaatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taatagcatatatggtgcctaaaatgtgtgcagctattctgtgggctgctcaaagaatgg 620
Query: 421 gattaataggaaagaaa 437
|||||||||||||||||
Sbjct: 621 gattaataggaaagaaa 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_i09.g1 MSMg01no457_i09.g1 CHROMAT_FILE:
MSMg01no457_i09.g1 PHD_FILE: MSMg01no457_i09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:45 2005
(250 letters)
>mm_chr1_77298062_77298712
Length = 651
Score = 362 bits (187), Expect = e-104
Identities = 234/253 (92%), Gaps = 7/253 (2%)
Strand = Plus / Minus
Query: 2 tttctgcatcctagatgttccatgttcaattctatcctttcctataggccctaggatttt 61
||||||||||| |||||||||| |||| |||||||||||||||||||||| |||| ||||
Sbjct: 559 tttctgcatcccagatgttccacgttcgattctatcctttcctataggccataggttttt 500
Query: 62 aaactgacagatgatgcatctatacaatacacagatattctctctacaggctggaaacga 121
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 499 aaactgacaggtgatgcatctatacaatacacagatattctctctacaggctgtaaaaga 440
Query: 122 gctgccagccagtctagtcaggctatgaccatttcttagacatgaaagactttcaacc-- 179
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 439 gctgccagctagtctagtcaggctatgcccatttcttagacatgaaagactttcaaccaa 380
Query: 180 --aatttataaaatctgctgggtcagagtgaaggaagacagcagcatctatccatctgga 237
|| | ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 379 gaaa---aaaaaatctgctgggccagagtgaaggaagacagcagcatctatccatctgga 323
Query: 238 gagctggtatgta 250
|||||||||||||
Sbjct: 322 gagctggtatgta 310
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 651
Length adjustment: 9
Effective length of query: 241
Effective length of database: 642
Effective search space: 154722
Effective search space used: 154722
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
