Query= MSMg01no457_o01.b1 MSMg01no457_o01.b1 CHROMAT_FILE:
MSMg01no457_o01.b1 PHD_FILE: MSMg01no457_o01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:15 2005
(175 letters)
>mm_chr1_89332353_89332927
Length = 575
Score = 319 bits (165), Expect = 5e-92
Identities = 171/173 (98%)
Strand = Plus / Minus
Query: 1 aaaatggtaaacttgaatttagaaacaccttacaatgcttaatctaaagcaacagcaaag 60
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 373 aaaatggtaaacttgaatttagaaacaccttacaatgcttaaacaaaagcaacagcaaag 314
Query: 61 accccagtgctagcctggtttttctgatttttatatgtatgaaatgtatgcacggataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 accccagtgctagcctggtttttctgatttttatatgtatgaaatgtatgcacggataaa 254
Query: 121 aacactaagcagcaccccaggaaaatgggtctataaatagcagagacagctga 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aacactaagcagcaccccaggaaaatgggtctataaatagcagagacagctga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 575
Length adjustment: 8
Effective length of query: 167
Effective length of database: 567
Effective search space: 94689
Effective search space used: 94689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no457_o01.g1 MSMg01no457_o01.g1 CHROMAT_FILE:
MSMg01no457_o01.g1 PHD_FILE: MSMg01no457_o01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:16 2005
(448 letters)
>mm_chr1_89168792_89169639
Length = 848
Score = 793 bits (410), Expect = 0.0
Identities = 439/450 (97%), Gaps = 4/450 (0%)
Strand = Plus / Plus
Query: 1 tttctcctggatatcttgtaatctgtctgtctctgcagtctgcatctacctctatgtttt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttctcctggatatcctgtaatctgtctgtctctgcagtctgcatctacctctatgtttt 260
Query: 61 cttcttgcttatgggtataggtctctgggcaggctatagtactggctactgggtggagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttcttgcttatgggtataggtctctgggcaggctatagtactggctactgggtggagct 320
Query: 121 gtgtggatattacatcagctgtcttagtaaccctccacttcacccctctgcgtttgaatg 180
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 321 gtgtggatattacatcagctgtcttagtaatcctccacttcacccctctgcgtttgaagg 380
Query: 181 tcccagctgactgaccgcagccactcctgcctgccttctgtccttgagaactgctcactg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcccagctgactgaccgcagccactcctgcctgccttctgtccttgagaactgctcactg 440
Query: 241 a--ctttgtctgtcttgccccgactcccttcactccttagcctcctttgttcttggtgtt 298
| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgcttc--ctgccttgccccgactcccttcactccttagcctcctttgttcttggtgtt 498
Query: 299 caccaagaccatcttgggggggtcaagcctctgactttctcccaagcctctgaaagtggg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 caccaagaccatcttgggggggtcaagcctctgactttctcccaagcctctgaaagtggg 558
Query: 359 tggagtcaacctgcacagataggccctgttccttcagtagtggcctgtgtttttgttgct 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tggagtcaacctgcacagataggccctgttccttcagtagtggcctgtgtttttgttgct 618
Query: 419 aatccccaacccttggcttagaggcctctg 448
|| |||||||||||||||||||||||||||
Sbjct: 619 aagccccaacccttggcttagaggcctctg 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
