Query= MSMg01no459_f12.b1 MSMg01no459_f12.b1 CHROMAT_FILE:
MSMg01no459_f12.b1 PHD_FILE: MSMg01no459_f12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:14 2005
(422 letters)
>mm_chr1_125993171_125993992
Length = 822
Score = 735 bits (380), Expect = 0.0
Identities = 400/410 (97%), Gaps = 7/410 (1%)
Strand = Plus / Minus
Query: 17 ctttgttgaatatttcttttttatttaatgcttttatagtttgtagtccacaccatcagt 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ctttgttgaatatttcttttttatttaatgcttttatagtttgtagtccacaccatcagt 391
Query: 77 actgctgacaagagttgtatttacacttcaagtatttaaagtcactttgtattttatata 136
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 390 actgctgacaagagttgtatttgcacttcaagtatttaaagtcactttgtattttatata 331
Query: 137 ctcaggcaatgttgatcaagtataatgctctctgtgtcagcttagagaagttgaagcaca 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ctcaggcaatgttgatcaagtataatgctctctgtgtcagcttagagaagttgaagcaca 271
Query: 197 attaattaaaagcagtagtgataatgatgaaaatggatacctgtgaagtggaggatagat 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 attaattaaaagcagtagtgataatgatgaaaatggatacctgtgaagtggaggatagat 211
Query: 257 atgcatatgcatatgcatatgcatat----atatatatatacaaattatcccttatattt 312
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 210 atgcatatacatatgcatatgcatatgcatatatatatatacaaattatcccttatattt 151
Query: 313 gaagctcaacttccctcattgttcttgctgtttcgatgaccttgttcttcttccttttgt 372
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 150 gaagctcaacttccctcgttgttcttgctgtttcgatgaccttgttcttc---cttttgt 94
Query: 373 gtgccggagacatttatacttctctgatcttgccataatcttttcctgat 422
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 gtgccggagacatttatacttctctgatcttgccataatcttttcctgat 44
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_f12.g1 MSMg01no459_f12.g1 CHROMAT_FILE:
MSMg01no459_f12.g1 PHD_FILE: MSMg01no459_f12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:14 2005
(342 letters)
>mm_chr1_125794761_125795502
Length = 742
Score = 615 bits (318), Expect = e-180
Identities = 336/342 (98%)
Strand = Plus / Plus
Query: 1 attctttagcagttttacaaggaaaaacatcaaccagctgactcagaattgtatagatat 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 attctttagcagttttacaaggaaaaacgtcaaccagctgactcagaattgtatagatat 260
Query: 61 gctatcaacctacatctatgaggctggcaacatttttggcgaatatatattttgaggttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctatcaacctacatctatgaggctggcaacatttttggcgaatatatattttgaggttt 320
Query: 121 catctactgtgttggcctatttaagcaaataattgtcacaacacacacaaacacaacaca 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 catctactgtgttggcctatttaagcaaataattatcacaacacacacaaacacaacaca 380
Query: 181 cacaacacacacacagttggctaagaagcattgaaaagaacataataaaagtaaagctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacaacacacacacagttggctaagaagcattgaaaagaacataataaaagtaaagctat 440
Query: 241 tcacttattttagattgtaaaagctgattccatgggaaatccaaagcaagaaaggttggt 300
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcacttaggttagattgtaaaagctgattccatgggaaatccaaagcaagaaaggttggt 500
Query: 301 gatattgatctcttaaaggcaagttaaagttacacaggctga 342
||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 501 gatatcggtctcttaaaggcaagttaaagttacacaggctga 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
