Query= MSMg01no461_b08.b1 MSMg01no461_b08.b1 CHROMAT_FILE:
MSMg01no461_b08.b1 PHD_FILE: MSMg01no461_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:32 2005
(339 letters)
>mm_chr1_60254570_60255308
Length = 739
Score = 656 bits (339), Expect = 0.0
Identities = 339/339 (100%)
Strand = Plus / Minus
Query: 1 aaagggtcttgtcacaaccactgggcctgaactaaaaattcctaagagtcattaaaggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aaagggtcttgtcacaaccactgggcctgaactaaaaattcctaagagtcattaaaggcc 400
Query: 61 acaaaaagaaagagaatttaaaaggaattaatgaaatcctttatttttattcttaacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 acaaaaagaaagagaatttaaaaggaattaatgaaatcctttatttttattcttaacaaa 340
Query: 121 tttaggcacaatgaaatcctttatttttattcttaacagatctaacatatagtttaattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tttaggcacaatgaaatcctttatttttattcttaacagatctaacatatagtttaattc 280
Query: 181 aatataccaaacatatattggctaactacagcttagagacaagtgaaatgaattacagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aatataccaaacatatattggctaactacagcttagagacaagtgaaatgaattacagta 220
Query: 241 ctattgtggtttggttttgttttcttttgtatgtgtaagtgttttgcctgcatgtacatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ctattgtggtttggttttgttttcttttgtatgtgtaagtgttttgcctgcatgtacatc 160
Query: 301 tgggtaccactagcatgtccagagcccttggaggccaga 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 159 tgggtaccactagcatgtccagagcccttggaggccaga 121
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_b08.g1 MSMg01no461_b08.g1 CHROMAT_FILE:
MSMg01no461_b08.g1 PHD_FILE: MSMg01no461_b08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:32 2005
(219 letters)
>mm_chr1_60056427_60057047
Length = 621
Score = 387 bits (200), Expect = e-112
Identities = 216/222 (97%), Gaps = 4/222 (1%)
Strand = Plus / Plus
Query: 1 attcttttctgaa-ccataaatctggggttttcctgatttgaggcccctaaaacatttag 59
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcttttctgaagccataaatctggggttttcctgatttgaggcccctaaaacatttag 260
Query: 60 gggtctgtctcctcagactgctgaagatgacgtagagctgggcttctgcccctcatcact 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggtctgtctcctcagactgctgaagatgacgtagagctgggcttctgcccctcatcact 320
Query: 120 gacccagtccttggccctcagataaagtggtagtttcaagtcaaggctctgcttctaagg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacccagtccttggccctcagataaagtggtagtttcaagtcaaggctctgcttctaagg 380
Query: 180 ctaggggaccactgatgcctcat--cccctcctcccccctcc 219
| ||||||||||||||||| | | |||||||||||||||||
Sbjct: 381 caaggggaccactgatgcccc-tgccccctcctcccccctcc 421
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 621
Length adjustment: 9
Effective length of query: 210
Effective length of database: 612
Effective search space: 128520
Effective search space used: 128520
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
