Query= MSMg01no461_d08.b1 MSMg01no461_d08.b1 CHROMAT_FILE:
MSMg01no461_d08.b1 PHD_FILE: MSMg01no461_d08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:43 2005
(246 letters)
>mm_chr1_110166125_110166770
Length = 646
Score = 462 bits (239), Expect = e-135
Identities = 239/239 (100%)
Strand = Plus / Minus
Query: 7 aaatagttcatttgggttgctataccaaacacccttagggtgggtactttgtaaatatca 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aaatagttcatttgggttgctataccaaacacccttagggtgggtactttgtaaatatca 500
Query: 67 ggcatttattgctaatattttgtagtttggaaattcaaagagaaaggcatcagccaacat 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ggcatttattgctaatattttgtagtttggaaattcaaagagaaaggcatcagccaacat 440
Query: 127 gtcatgtgagaacatccttaatctattccctgatgttcccacttcttaacacttttatgt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gtcatgtgagaacatccttaatctattccctgatgttcccacttcttaacacttttatgt 380
Query: 187 tagaaactatattctaatatatgaaattcaatatctaccaaagtcagagcataaaccta 245
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tagaaactatattctaatatatgaaattcaatatctaccaaagtcagagcataaaccta 321
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_d08.g1 MSMg01no461_d08.g1 CHROMAT_FILE:
MSMg01no461_d08.g1 PHD_FILE: MSMg01no461_d08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:43 2005
(326 letters)
>mm_chr1_110007823_110008545
Length = 723
Score = 522 bits (270), Expect = e-152
Identities = 311/326 (95%), Gaps = 3/326 (0%)
Strand = Plus / Plus
Query: 1 cacgttatattttaatcaattacatggagttcagtgaaatcatggtagaggctgctgtac 60
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 201 cacgttatattttaatcaattacatggagttcagtgaaatcatggcagaggctgttgtac 260
Query: 61 ataataggttgtctagagtatgcatatactgcgtattagaagacaataatctaaatattt 120
|||||||||| ||||||||||||||| ||| |||| ||||||||||||||||||||||
Sbjct: 261 ataataggttatctagagtatgcatacactacgta---gaagacaataatctaaatattt 317
Query: 121 cactttacctgtattgtaattttcaagatggatttctatgctataccaattgtgggttaa 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 318 cactttacctgtattgtaattttcaagatggatttctatgctatgccaattgtgggttaa 377
Query: 181 tatagacatcccagattcccatcatttcttcatgttgttggagagaatatggctaacagt 240
|| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 378 taaagacatcccagattcccatcatttcttcatgttgttggagagaatgtggctaacagt 437
Query: 241 ttatataatgcttcttttccttgacagtctattgtcaatgctagtatacatttggaactt 300
|||||||| || |||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 438 ttatataaagcatcttttccttgacagtctattgtcaatgctagcattcatttggaactt 497
Query: 301 tccatttagaggtgagtttggagttg 326
||||||||||||||||||||||||||
Sbjct: 498 tccatttagaggtgagtttggagttg 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 723
Length adjustment: 9
Effective length of query: 317
Effective length of database: 714
Effective search space: 226338
Effective search space used: 226338
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
