Query= MSMg01no461_n14.b1 MSMg01no461_n14.b1 CHROMAT_FILE:
MSMg01no461_n14.b1 PHD_FILE: MSMg01no461_n14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:36 2005
(438 letters)
>mm_chr1_13175249_13176084
Length = 836
Score = 816 bits (422), Expect = 0.0
Identities = 434/438 (99%), Gaps = 2/438 (0%)
Strand = Plus / Minus
Query: 1 gatttcatagttgaagtaaccaattttcttcagggattttctgttgctcaaaggacttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gatttcatagttgaagtaaccaattttcttcagggattttctgttgctcaaaggacttgt 577
Query: 61 gcttgttacctcctgtctgaagacccctccccctggcctcacgcaccttttctttagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gcttgttacctcctgtctgaagacccctccccctggcctcacgcaccttttctttagttt 517
Query: 121 ccacttcttagtgtgggctgataagcatgttttcctttcttcttggacagttctgtagcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ccacttcttagtgtgggctgataagcatgttttcctttcttcttggacagttctgtagcg 457
Query: 181 tctcattatgttaatagatttcacaaatgctgatagactaaaggtagaggtgtaaaggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tctcattatgttaatagatttcacaaatgctgatagactaaaggtagaggtgtaaaggta 397
Query: 241 cctggatgtattcagagcggtgggcaggcaagtgaccttggcttcctgctctctgagtgg 300
|||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cctggatg-a-ccagagcagtgggcaggcaagtgaccttggcttcctgctctctgagtgg 339
Query: 301 ttttccttccagcctgtgagcaagccttggcctgggtccactgtggcatctctgtccctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ttttccttccagcctgtgagcaagccttggcctgggtccactgtggcatctctgtccctg 279
Query: 361 tcacctgttaggccaatgactgcttttcataaggttgccatttcattgggggatggtaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tcacctgttaggccaatgactgcttttcataaggttgccatttcattgggggatggtaaa 219
Query: 421 gaaaagcattaaggtggt 438
||||||||||||||||||
Sbjct: 218 gaaaagcattaaggtggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 836
Length adjustment: 9
Effective length of query: 429
Effective length of database: 827
Effective search space: 354783
Effective search space used: 354783
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_n14.g1 MSMg01no461_n14.g1 CHROMAT_FILE:
MSMg01no461_n14.g1 PHD_FILE: MSMg01no461_n14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:36 2005
(454 letters)
>mm_chr1_12993127_12993980
Length = 854
Score = 793 bits (410), Expect = 0.0
Identities = 443/454 (97%)
Strand = Plus / Plus
Query: 1 tctaatatacagctgtcccttggtgttcacagaagactggattcaggatacgcatttgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 tctaatatacagctgtcccttggtgttcacagaagactggattcaggatacacatttgaa 260
Query: 61 gcactggtgcccacccccagctagtggatctattcactgagaggtgtctgaatcttgaag 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 gcactggtgcccacccccagctagtggatctattcactgagaggtgtttgaatcttgaag 320
Query: 121 gctctgacctaatcaattgattagtcagttgatgacctcataatttggtggcatgatcgg 180
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 321 gctctgacctaatcaattgattagtcagttgatgacctaataatttggtgacatgatcgg 380
Query: 181 agattgtgggaggagcctattggggtctgttttttcaggagggtgtatgctgtacttgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agattgtgggaggagcctattggggtctgttttttcaggagggtgtatgctgtacttgat 440
Query: 241 ctacttgtctctcactctgcttcctggttcatgtgtagccagcatctattgtgctccgtg 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 ctacttgtctctcactctgcttcctggttcatgtgcagccagcatctattgtgctccgtg 500
Query: 301 tccttcccctaaggtaattttgctcactcgcagattaaaaagcactagatccagctgact 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 tccttcccctaaggtaattttgctcaatcgcagattaaaaagcactagatccagctgact 560
Query: 361 ctggatcaagtctctgaaacgaggtcaaaagagagagcccctcccttaatttgattctct 420
||||| |||||||||||||||||||||||||| |||| |||||||| |||||||||||||
Sbjct: 561 ctggaccaagtctctgaaacgaggtcaaaagaaagagtccctccctcaatttgattctct 620
Query: 421 gtcgtatctagtcatggcgatggaaaactaatac 454
|||||||||||||| |||||||||||||||||||
Sbjct: 621 gtcgtatctagtcacggcgatggaaaactaatac 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
