CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTTTTTCATGTGCTCCTAAAAGAGAATTTAGTTAAGACACGGGA
GTAGACCAAGATGCCAAGAGTTTAACTAGATCAAATAAAGAAAGACCACA
AGAGTATACTCTAGAAAAAGAGTGGTAAACCGTACAGCGATACCCCTGTT
TTAGCAACCATGAGACTCGCATTTGCCCCTCTGTGTTATCCCCCTCTCTT
CTTCCTTCTACGTGGGAGAGACTTACAGGAAGCAGATCTGCTTTTTGGAA
AACCATGCTACCAGGCAGCTAGTCTGTCACAGGAGATGTATAAGATATAA
GAATGTATATAGGTGCTGAAGTAAGAATAAAGTTGAAATGCTCCATGTGC
CCAGTATATGTAATCCCTGTTACAAGAAAGAGAATCAACTTTTAGATACT
TAACTGCACCTTTGCATTTTAAATCAGTCTTATTTTCAAGGTACATGGGG
AAATGGATGTAACAAAAAGAGCCAGCTGTTGGCCTTTCAATTAAGAAAAA
AGAAAAATAAGCTCCAACAGAATGACAAAGAACCAACACCCAAGTCTCTA
CAACGTAGGCAACAAACCAAAGATGCAACAGATGCTGCCTCCCATAGCTT
CACAGGGTTTTGCGAAAGGAATCTCCCTTGAAAGTTTGCCCGTGAGAAAA
ATGCCGATTTTTGAATAATTCCAAACTCTCTGGGGGCCCCGGGAAGAAAC
CTACTTACTGCTGTGGGGCTTGAAAG

GATGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXATCATCTGATTCAGAGCTACCAAGAGC
TGGCTCCCCGAGCCCATCCAGCGATGAGCACAGGCTCCTTTTCCTAGAGA
CCTCCGCTAATTGATCTTTCTTCTTTTCCCTTTTTCCTCTTTTTCTTCTA
ATCTCTCTCCAGGTATTCCTACCTAACCTTAACTTTTCCTCGGGTTCAAG
ACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTG
TTCCTACTCTCTCTCCCCACTTTACTTCTGATAGCTTGTCCTGAATTTCC
TCTAGAATTTTCAGCCCTATCTTAATCACTTGATAACATGTGAAAAGGAA
CAAAAGGGCTCCTAACACCAGAAAAAATTCAAGGCCAAACATATTCCACT
TTACTTCTGATAGACTGTCTTGAATTTCCTTAGAAAGTTCAAGACCAGAC
TTACCTCGTAAAGCTGTACTCACTGGTACTCTCGTTCCCCAGCTGANNAG
TTCTGAATTCATACAGTTGAATCCTTCTTAACAGTCTGCTTTACGGGAAC
CTTTATTACCGCGACCCGCAGTTCTGGTTCTGGAATGAGGGATCTTCCTT
GCGCCAGTCCCGAGTTTTTTCTCGGCCCGGAAATCGGGTACCCTTGTGAT
TAAAAGCGGTTCCCCGAACGGTCTTGAAGGAACCCTTAAACCCGAAATCT
TTGGGCGGAAAGTTT

Query= MSMg01no462_b08.b1 MSMg01no462_b08.b1 CHROMAT_FILE:
MSMg01no462_b08.b1 PHD_FILE: MSMg01no462_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:56 2005
         (488 letters)



>mm_chr1_148926759_148927646
          Length = 888

 Score =  913 bits (472), Expect = 0.0
 Identities = 481/484 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttttttcatgtgctcctaaaagagaatttagttaagacacgggagtagaccaa 64
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 205 gaattctttttttcatgtgctcctaaaagagaatttagttaagacatgggagtagaccaa 264

                                                                       
Query: 65  gatgccaagagtttaactagatcaaataaagaaagaccacaagagtatactctagaaaaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gatgccaagagtttaactagatcaaataaagaaagaccacaagagtatactctagaaaaa 324

                                                                       
Query: 125 gagtggtaaaccgtacagcgatacccctgttttagcaaccatgagactcgcatttgcccc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 325 gagtggtaaaccgtacagcgatacccctgttttagcaaccatgagactcacatttgcccc 384

                                                                       
Query: 185 tctgtgttatccccctctcttcttccttctacgtgggagagacttacaggaagcagatct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctgtgttatccccctctcttcttccttctacgtgggagagacttacaggaagcagatct 444

                                                                       
Query: 245 gctttttggaaaaccatgctaccaggcagctagtctgtcacaggagatgtataagatata 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gctttttggaaaaccatgctaccaggcagctagtctgtcacaggagatgtataagatata 504

                                                                       
Query: 305 agaatgtatataggtgctgaagtaagaataaagttgaaatgctccatgtgcccagtatat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agaatgtatataggtgctgaagtaagaataaagttgaaatgctccatgtgcccagtatat 564

                                                                       
Query: 365 gtaatccctgttacaagaaagagaatcaacttttagatacttaactgcacctttgcattt 424
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtaatccctgttacaagcaagagaatcaacttttagatacttaactgcacctttgcattt 624

                                                                       
Query: 425 taaatcagtcttattttcaaggtacatggggaaatggatgtaacaaaaagagccagctgt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taaatcagtcttattttcaaggtacatggggaaatggatgtaacaaaaagagccagctgt 684

               
Query: 485 tggc 488
           ||||
Sbjct: 685 tggc 688


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space:   419684
Effective search space used:   419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)