Query= MSMg01no463_f03.b1 MSMg01no463_f03.b1 CHROMAT_FILE:
MSMg01no463_f03.b1 PHD_FILE: MSMg01no463_f03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:40 2005
(524 letters)
>mm_chr1_19911796_19912718
Length = 923
Score = 975 bits (504), Expect = 0.0
Identities = 519/524 (99%), Gaps = 1/524 (0%)
Strand = Plus / Minus
Query: 1 tccaattgcctagtggcagtcagggttacatcttcaacggagaataatgagaacaggaag 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 tccaattgcctaatggcagtcagggttacatcttcaacggagaataatgagaacaggaag 664
Query: 61 tagaaactagggaagcacctaaggacatggaaacccaaagcagtggtttcagaaacgttg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 663 tagaaactagggaagcacctaaggacatggaaacccaaagcagtggtttcagaaactttg 604
Query: 121 ttggtttttaggctaggactatgagaaaggagatctgatctcttatcttctcaataagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 603 ttggtttttaggctaggactatgagaaaggagatctgatctcttatcttctcaatgagca 544
Query: 181 gccctgccaggaggctacatgccagggagagagaagagaatgtctacgcagaggctgatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gccctgccaggaggctacatgccagggagagagaagagaatgtctacgcagaggctgatc 484
Query: 241 cttcctggtgatcagtattggaatgggatctctgtgttttcatggaaaaaaaatggttca 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 483 cttcctggtgatcagtattggaatgggatctctgtgttttcatgg-aaaaaaatggttca 425
Query: 301 tatttattccctaatctcagctcgtctattaaatgttttttttaccattacctattcaga 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 424 tatttattccctaatctcagctcatctattaaatgttttttttaccattacctattcaga 365
Query: 361 gcagaaatgatcaacccattaaagaaaacttctgatcaagataatagaatttttggcctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gcagaaatgatcaacccattaaagaaaacttctgatcaagataatagaatttttggcctg 305
Query: 421 actggagacttaatatttagctgctcacatcaaccacctgatcaaggaaggttcaccaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 actggagacttaatatttagctgctcacatcaaccacctgatcaaggaaggttcaccaga 245
Query: 481 aaccatgatcatgaaacgggtggaatacttatccctttgatgag 524
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aaccatgatcatgaaacgggtggaatacttatccctttgatgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 923
Length adjustment: 10
Effective length of query: 514
Effective length of database: 913
Effective search space: 469282
Effective search space used: 469282
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_f03.g1 MSMg01no463_f03.g1 CHROMAT_FILE:
MSMg01no463_f03.g1 PHD_FILE: MSMg01no463_f03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:41 2005
(245 letters)
>mm_chr1_19736728_19737374
Length = 647
Score = 391 bits (202), Expect = e-113
Identities = 234/246 (95%), Gaps = 4/246 (1%)
Strand = Plus / Plus
Query: 1 tgtttagctcttttccccatttttttaataggtttatttggttctctggcatttctaagt 60
||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||
Sbjct: 201 tgtttagctcttttcccca-tttttaaataggtttatttggttctctgacatttctaagt 259
Query: 61 ttatatgtgtctaagtaaatgagagaggagggtacaggggagggacatgggtgttggaat 120
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 260 ttatatgtgtctaagtaaacgagagagcagggtacaggggagggacatgggtgttggaat 319
Query: 121 tatttttaattaccctggagaaaaattgcttacttaaaggctctagactttatccactat 180
||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 320 tatttttaattacactggagaaaaattgcttacttgaaggctctagactttatccactat 379
Query: 181 cattttctttagcatatccacaaaatgt---cattaatttatccaatgcaaagcatcagt 237
|||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||
Sbjct: 380 cattttctttagcatatccacaaaatgttgtcattaatttatccaacgaaaagcatcagt 439
Query: 238 gcatgg 243
||||||
Sbjct: 440 gcatgg 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 647
Length adjustment: 9
Effective length of query: 236
Effective length of database: 638
Effective search space: 150568
Effective search space used: 150568
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
