Query= MSMg01no465_f01.b1 MSMg01no465_f01.b1 CHROMAT_FILE:
MSMg01no465_f01.b1 PHD_FILE: MSMg01no465_f01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:22 2005
(589 letters)
>mm_chr1_151395042_151396031
Length = 990
Score = 1071 bits (554), Expect = 0.0
Identities = 579/590 (98%), Gaps = 7/590 (1%)
Strand = Plus / Plus
Query: 4 ggaattcttaatttcc---atgaagggaagacacaacttgtatatttattcctgaaccta 60
||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttaa---cctgaatgaagggaagacacaacttgtatatttattcctgaaccta 260
Query: 61 ataagtcatgaacctatcaaatccagttgagagtgcattgacactcaaacacttcattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataagtcatgaacctatcaaatccagttgagagtgcattgacactcaaacacttcattaa 320
Query: 121 aacaagtatcctgtgacatatatgtaaggaatgaatatgtgcatagtttaataatttgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacaagtatcctgtgacatatatgtaaggaatgaatatgtgcatagtttaataatttgtc 380
Query: 181 caactgtatggtttccttaaattttcactgttatcagtgaatacccaactattaccaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caactgtatggtttccttaaattttcactgttatcagtgaatacccaactattaccaact 440
Query: 241 caatctctttttcaatttgataaaaaccttaataacaattcactctgaggttttggctaa 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 caatctctttttcaatttgataaaaaccttaagaacaattcactctgaggttttggctaa 500
Query: 301 ataacttttactcaaaaaaaaaa-taatgcagctgttttttattagtttagtgttgttag 359
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataacttttactcaaaaaaaaaaataatgcagctgttttttattagtttagtgttgttag 560
Query: 360 agacatataaaaagtgaaatcaggactagatattgatctcacagttaattaagtcctatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agacatataaaaagtgaaatcaggactagatattgatctcacagttaattaagtcctatc 620
Query: 420 ctggagttagtatctccctaattaatggcatgcatgctaataaagaaaaatgtcccttgt 479
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 621 ctggagttagtatctccctaattaatggcgtgcatgctaataaagaaaaatgtcccttgt 680
Query: 480 aatagatgtgtctttgatttttctacattttatgtgaagagaagaaactagtgaaagtta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatagatgtgtctttgatttttctacattttatgtgaagagaagaaactagtgaaagtta 740
Query: 540 aatttcttttctcttagcttcaagagttattcccggtcttactctcaatt 589
||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 741 aatttcttttctcttagcttcaagagttattcctggtgttactctcaatt 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 990
Length adjustment: 10
Effective length of query: 579
Effective length of database: 980
Effective search space: 567420
Effective search space used: 567420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_f01.g1 MSMg01no465_f01.g1 CHROMAT_FILE:
MSMg01no465_f01.g1 PHD_FILE: MSMg01no465_f01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:22 2005
(495 letters)
>mm_chr1_151534879_151535773
Length = 895
Score = 588 bits (304), Expect = e-172
Identities = 307/308 (99%)
Strand = Plus / Minus
Query: 185 agacatgacacaggcagagatgagagttctacatcttcacccaaaggcagctagtggaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 agacatgacacaggcagagatgagagttctacatcttcacccaaaggcagctagtggaag 836
Query: 245 attggcttccaggcacctagggtgagagcattaagcccacacccacagtgacacacctac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 attggcttccaggcacctagggtgagagcattaagcccacacccacagtgacacacctac 776
Query: 305 tccaaccaggtcacacctattccaacaaagccacaccaccaaatgatgccactccctggt 364
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 775 tccaaccaggtcacacctatttcaacaaagccacaccaccaaatgatgccactccctggt 716
Query: 365 ccaagaatatacaaaccatcacacccagttaaagagtatttttaggtgagcattaatgac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ccaagaatatacaaaccatcacacccagttaaagagtatttttaggtgagcattaatgac 656
Query: 425 ttcagctttctagagtttgaagtaacaacagaaactatgaagaatctttgtagagatcac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ttcagctttctagagtttgaagtaacaacagaaactatgaagaatctttgtagagatcac 596
Query: 485 tttgctga 492
||||||||
Sbjct: 595 tttgctga 588
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
