Query= MSMg01no465_p21.b1 MSMg01no465_p21.b1 CHROMAT_FILE:
MSMg01no465_p21.b1 PHD_FILE: MSMg01no465_p21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:18 2005
(475 letters)
>mm_chr1_191449975_191450849
Length = 875
Score = 528 bits (273), Expect = e-154
Identities = 319/343 (93%), Gaps = 16/343 (4%)
Strand = Plus / Minus
Query: 2 ccctttaaccttttctcgttgttaaattttgagagtttctcacaatccattttactcatg 61
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 331 ccctttaaccttttctcgttgttaaattttgagagtttctcacaatcaattttactcatg 272
Query: 62 ttcacccctggcactttccacaacttctcacagatttaccccacatctccataccccgat 121
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 271 ttcacccctggcactttccacaacttctcacagatttaccccacatctccttaccccgat 212
Query: 122 cctgtatcttacaaacaaacaaacaaacaaacaaacaaacaaacaaacaatccctaccaa 181
|||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 cctgtatctt--------acaaacaaacaaacaaacaaacaaacaaacaatccctaccaa 160
Query: 182 ctctggtttgtattggtcctacacttgtggctgtggagccatctactagagcttggtcag 241
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 159 ctctggtttgtattggtcctacacttgtggctgtggagccatctactggagcttggttag 100
Query: 242 actacca----tttttctaaccctgagacaactgacactccctccccagcagccatcacc 297
||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 actaccagcag----tcaaaccctgagacaactgacactccctccccagcagccatcacc 44
Query: 298 taccctggctcctcagtcagggctgggggctcacgaatgccat 340
||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 43 taccctgactcctcagtcatggctgggggctcacgaacgccat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_p21.g1 MSMg01no465_p21.g1 CHROMAT_FILE:
MSMg01no465_p21.g1 PHD_FILE: MSMg01no465_p21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:18 2005
(274 letters)
>mm_chr1_191267359_191268032
Length = 674
Score = 474 bits (245), Expect = e-138
Identities = 266/273 (97%)
Strand = Plus / Plus
Query: 1 attagtgttactttattaacaagatgaagaaacccaagagggaccccagtttccctagca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attagtgttactttattaacaagatgaagaaacccaagagggaccccagtttccctagcg 260
Query: 61 tatggtagatttgtcctgccttttattctttaattgacggagaagacaagcctattcctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 tatggtagatttgtcctgccttttattctttaattgacggagaagacaagcctatccctg 320
Query: 121 aaccctagacagcatccagaggagatgggaagggagtatgaagccagcattgggcgtaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 321 aaccctagacagcatccagaggagatgggaagggagtatgaagccagcattgggcatagt 380
Query: 181 aaatgaacagctgagccttctcacaggcaacacttcccaccccaccttctctctcgtctc 240
|||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatgaacggctgagccttctcccaggcaacacttcccaccccaccttctctctcgtctc 440
Query: 241 taagtcccggctccttgccagaagatccaggtg 273
|||||||||||||||| ||||||||||||||||
Sbjct: 441 taagtcccggctcctttccagaagatccaggtg 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
