Query= MSMg01no466_b13.b1 MSMg01no466_b13.b1 CHROMAT_FILE:
MSMg01no466_b13.b1 PHD_FILE: MSMg01no466_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:27 2005
(503 letters)
>mm_chr1_82680473_82681372
Length = 900
Score = 700 bits (362), Expect = 0.0
Identities = 427/452 (94%), Gaps = 11/452 (2%)
Strand = Plus / Minus
Query: 56 aaaattgaagcaatcccactaaaatcagggactagacaaggctgcccatattctccctac 115
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 900 aaaattgaagcaatcccactaaaatcagggactagacaaggctgcccacattctccctac 841
Query: 116 ctattcaatacagtacttgaagtcctagccagagcaattagacaacaaaaggaggtcaat 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 ctattcaatacagtacttgaagtcctagccagagcaattagacaacaaaaggaggtcaat 781
Query: 176 gtgatataaattggaaagaaagaagttaaaatatcagtatttgcagatgatatgatagta 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 780 gtgatataaattggaaagaaagaagttaaaatatcagtatttgcagatgatatgattgta 721
Query: 236 tatataagtgattaaaaaaaaaaaaa----gaattggcttgatactggttgtataaactg 291
||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 720 tatataagtgaccaaaaaaaaaaaaaaaaagaattggcttgatactggtcgtataaactg 661
Query: 292 tataacaaaagcacctgcaaaaatcaccaggtgatttgtaataatttgaatggatttgat 351
|||||||||| ||||||||| | |||| ||||||||||||||||||||||||||||
Sbjct: 660 tataacaaaaacacctgcaagag---ccag-tgatttgtaataatttgaatggatttga- 606
Query: 352 cttt-agtccaatagtcacacctaacaagtaaccatatgctgagagactaaagttcagga 410
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 605 cttttagtccaatagtcacacctaacaagtaaccatatgctgagagactaaagctcagga 546
Query: 411 caagagatgttttcctgactgttattctccaaggactttgaacatgagaagatgtttttt 470
||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 545 caagagatgttttcccgactgttattctccaaggactttgaacgtgagaagatgtttttc 486
Query: 471 gatgcaa-ctggaaaaaaatctatcctgatag 501
||||||| | | ||||||||||||||||||||
Sbjct: 485 gatgcaagcagaaaaaaaatctatcctgatag 454
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 900
Length adjustment: 10
Effective length of query: 493
Effective length of database: 890
Effective search space: 438770
Effective search space used: 438770
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no466_b13.g1 MSMg01no466_b13.g1 CHROMAT_FILE:
MSMg01no466_b13.g1 PHD_FILE: MSMg01no466_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:27 2005
(424 letters)
>mm_chr1_82481603_82482426
Length = 824
Score = 820 bits (424), Expect = 0.0
Identities = 424/424 (100%)
Strand = Plus / Plus
Query: 1 cttaattgaatgactggttcttatggaacatggggacactctctagagatgtgggtctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttaattgaatgactggttcttatggaacatggggacactctctagagatgtgggtctgg 260
Query: 61 tcatttgtaccagctgcaatttgagatgcttcgatcacgacatagacggcttctgaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcatttgtaccagctgcaatttgagatgcttcgatcacgacatagacggcttctgaaaca 320
Query: 121 tgcgtggagaggaagtcatgatatgtgtacgtatgccagatcctatctggtacctttgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcgtggagaggaagtcatgatatgtgtacgtatgccagatcctatctggtacctttgac 380
Query: 181 ctgtgtggaaaataagaactctctgaagcttccgtgtctcactgcctagagtctaagagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtgtggaaaataagaactctctgaagcttccgtgtctcactgcctagagtctaagagt 440
Query: 241 cgcttctgagttctaatttgtgaagcaatttatcattaacaagatactcactctcaacgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgcttctgagttctaatttgtgaagcaatttatcattaacaagatactcactctcaacgc 500
Query: 301 tagaattcctggaactctgaatttgctagctgggaacattttccaagccatacctttagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagaattcctggaactctgaatttgctagctgggaacattttccaagccatacctttagg 560
Query: 361 tcctcttgctccatcatctcctgggaatccagggggtcctggagaacctggatcaccctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcctcttgctccatcatctcctgggaatccagggggtcctggagaacctggatcaccctg 620
Query: 421 acaa 424
||||
Sbjct: 621 acaa 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
