XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCAAAATCCGCGGAATTCTT
CTATGTCCCGATGCACTTATTTGTTAACGGGTTCAACCTAAACCGTAAAT
GTTTTCCAAGGGTTTGAAATGAGAAGGATGGGACTTCAAGCAGATCCCTC
TACATGACAGACACTGATGGCAGAGCCGTTAAGCCCAAGTAGGCTGCTGT
GGAGAAGTATGGACAGGCCAAGGGCTATATATTGCTCTTGGGCTTAAATC
TTTAGTGACACAGAGGAGGCGTTCACCTCTTAACTCCATGGCAGTATCCC
GGCAAGGGACTGTCTGGTCAAGGTGGATAGTGGTGATCAGGAGATCACAT
GATCCTGGACTTCCTCTGTCTGCCTGGTGGGATTAAAGGTACATTTAGAA
GCAGTCTGACCTAAGCATGGGCAGAAGCTGATCACAAAAAACAAACAAAT
AAACCAACAACTCACAAAACAAAACAAAACAAAACAAAGCAAAGCAAAGC
AACAACAGCAACAAAACCAACCTGAAACAAGATAAAAGCAAACCAAACCC
GTCCAGGAGTGCTGGAAGTGTAGGGCAGCTATAGAGGGCTTGCCTAGTAT
TTGCAAGGCTTTGAGTCTGATCTCTTACATCCCTAGAGAGGAACACTAGA
GAGACGAATAATCAAGGAACAAGAGAGGCACTGGCTTGATTCTTTTGAGT
GTCTCCTGAGTTCCAGGATCTCCCTGTAGCTTGT

GACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTGCACTAAAACCATCTNGTCCCGGGCTTTT
TTTTTTTTTTTTTTTTCCTCTTTTTTTTTTTTTTTTTCGGNGGGGGGGGC
GGCGCCCGCCCCGCGGCGGGGGGGGGTCCGCGTGCGGGGGGCCCGCCCGC
GCGCGCCGCGGCCCGGGCCCCGCCCCCGCCGGGCCCGCCCCCCCCCCCGC
CCCCCCGCGCCGCCGCCCCGGCCCCGCCGGCCCCGCCGGCCCGCCCCCCC
GCCCCCCTTTGTTTGTCCCGCCTGCCCTCCCGCCCCCCCCCGGGGCGGGC
GGGCCGCACCCTCAACCCGCCCCACGGGGCGCGGCCCCCCTGGCCCCCCG
GCCCGCGCCGCCCCCCCCCCCCCCGGCGCCCCCGCGGGCCGCCCCCGCGC
CCCGCCACCCCGTAGGACCCCCACACCACAACCACCCCCCACAACCAACC
GCAACCCCAGCCAAACGGACCCCAAAACACCACCCACCAACACACAAACC
CACCCCCACACCCACCAAGACCCCCAAGACCCCCACCCCCCCAACCCAAG
TCACACCACCACACCGTCCACATCAAACCACCCAACCACACAACCCCCGA
CCGAAACCCCCAAACAGCCAACCACGAACCCGGAACCACACCACCACAAC
CCACAGACAAAAAACCCAAGCACACACCCCTCCCACCCGGACAGACCCCC
AAACCCCACCCCAGCACCCCCCCACAAACACACACACACGCGCCCCGCAC
CCAAAACCACAACGACAGCACCTCCCCACAAACCCACA

Query= MSMg01no467_c15.b1 MSMg01no467_c15.b1 CHROMAT_FILE:
MSMg01no467_c15.b1 PHD_FILE: MSMg01no467_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:56 2005
         (578 letters)



>mm_chr1_63502168_63503145
          Length = 978

 Score =  967 bits (500), Expect = 0.0
 Identities = 558/590 (94%), Gaps = 22/590 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacttatttgttaacgggttcaacctaaaccgtaaatgttttccaagggtttgaaatgag 60
           |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 201 cacttatttgttaacgggttcaacttaaacagtaaatgttttccaagggtttgaaatgag 260

                                                                       
Query: 61  aaggatgggacttcaagcagatccctctacatgacagacactgatggcagagccgttaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggatgggacttcaagcagatccctctacatgacagacactgatggcagagccgttaag 320

                                                                       
Query: 121 cccaagtaggctgctgtggagaagtatggacaggccaagggctatatattgctcttgggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccaagtaggctgctgtggagaagtatggacaggccaagggctatatattgctcttgggc 380

                                                                       
Query: 181 ttaaatctttagtgacacagaggaggcgttcacctcttaactccatggcagtatcccggc 240
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 ttaaatctttagtgacacagaggaggggttcacctcttaactccatggcagtatcccggc 440

                                                                       
Query: 241 aagggactgtctggtcaaggtggatagtggtgatcaggagatcacatgatcctggacttc 300
           ||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||
Sbjct: 441 aagggactgtctggtcaaggttgatagtggcgatcgggagatcacatgatcctggacttc 500

                                                                       
Query: 301 ctctgtc--------tg----cctggtgggattaaaggtacatttagaagcagtctgacc 348
           || ||||        ||    ||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 ctttgtccaggatcatgtgatcctggtgggattaaaggtacatttagaagtagtctgacc 560

                                                                       
Query: 349 taagcatgggcagaagctgatcacaaaaaacaaacaaataaaccaacaactcacaaaaca 408
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taagcatgggcagaagctgatcacaaaaaacaaacaaataaaccaacaactcacaaaaca 620

                                                                       
Query: 409 aaacaaaacaaaacaaagcaaagcaaagcaacaacagcaacaaaaccaacctgaaacaag 468
           |||||||          ||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 621 aaacaaa----------gcaaagcaaagcaacgacagcaacaaaaacaacctgaaacaag 670

                                                                       
Query: 469 ataaaagcaaaccaaacccgtccaggagtgctggaagtgtagggcagctatagagggctt 528
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ataaaagcaaaccaaacccgtccaggagtgctggaagtgtagggcagctatagagggctt 730

                                                             
Query: 529 gcctagtatttgcaaggctttgagtctgatctcttacatccctagagagg 578
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gcctagtatttgcaaggctttgagtctgatctcttacatccctagagagg 780


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space:   549824
Effective search space used:   549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)