Query= MSMg01no471_d16.b1 MSMg01no471_d16.b1 CHROMAT_FILE:
MSMg01no471_d16.b1 PHD_FILE: MSMg01no471_d16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:25 2005
(668 letters)
>mm_chr11_88879489_88880557
Length = 1069
Score = 1249 bits (646), Expect = 0.0
Identities = 661/666 (99%), Gaps = 1/666 (0%)
Strand = Plus / Plus
Query: 4 ggaattccaggctcttactattggcattcccgacagacgtgtgatctgtgtcttctccta 63
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 204 ggaattccaggctcttagtattggcattcccgacagacgtgtgatctgtgtcttctccca 263
Query: 64 gaggaatattctattccctttaagcatctttgcagggaacatgtccctgtagatggtatg 123
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 264 gaggaatattctattccctttaagcatctttacagggaacatgtccctgtagatggtatg 323
Query: 124 tgggctttgaaagatttcttcctttgccacacaaattcttggcgatacttctccaacttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgggctttgaaagatttcttcctttgccacacaaattcttggcgatacttctccaacttt 383
Query: 184 gaaggtgcccaaaaagcttctttgctggtcttgttttgagccttgtttgaggccagatca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaaggtgcccaaaaagcttctttgctggtcttgttttgagccttgtttgaggccagatca 443
Query: 244 gacttgggaaacaactaggttcagagaagtggaacaccaaggattaactcaggagtcctg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gacttgggaaacaactaggttcagagaagtggaacaccaaggattaactcaggagtcctg 503
Query: 304 catgggctcttctgcagaaaaggagccggacagtcaggaatctttccccaggcagtgtgc 363
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 504 catgggctcttctgcagaaaaggagccggacagtcaggactctttccccaggcagtgtgc 563
Query: 364 agctcaggctaggaaggcatgcgtccctctgtttatgagagacccaagcaggcaaccaaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agctcaggctaggaaggcatgcgtccctctgtttatgagagacccaagcaggcaaccaaa 623
Query: 424 gcccagagctgtgcaagatgctttggagttgtgagtggaggggtgtacccttgctgtctg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gcccagagctgtgcaagatgctttggagttgtgagtggaggggtgtacccttgctgtctg 683
Query: 484 gtacttttctgtttgcagtgataagaccttacctta-ccataagcatttctgggtagatg 542
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 684 gtacttttctgtttgcagtgataagaccttaccttaaccataagcatttctgggtagatg 743
Query: 543 gactaagagttcatcagagtgcacatctcacttggctctttgcagagtcaggcaggtggg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gactaagagttcatcagagtgcacatctcacttggctctttgcagagtcaggcaggtggg 803
Query: 603 aaggtgggggatggctctgctcaagtcctcttgtcattccaacatggaagagactcctaa 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aaggtgggggatggctctgctcaagtcctcttgtcattccaacatggaagagactcctaa 863
Query: 663 cgtggg 668
||||||
Sbjct: 864 cgtggg 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1069
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1059
Effective search space: 696822
Effective search space used: 696822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_d16.g1 MSMg01no471_d16.g1 CHROMAT_FILE:
MSMg01no471_d16.g1 PHD_FILE: MSMg01no471_d16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:25 2005
(623 letters)
>mm_chr1_96195415_96196436
Length = 1022
Score = 692 bits (358), Expect = 0.0
Identities = 385/394 (97%), Gaps = 3/394 (0%)
Strand = Plus / Minus
Query: 231 tgagcaagccgggtgaggcaagccaataatgaacatccctccatggcctctgcatcagct 290
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1022 tgagcaagccgggtgaggcaagccaataatgaacatccttccatggcctctgcatcagct 963
Query: 291 cctgctccctgacctgacctgcttgagttccagtcctgacttccttcaatatggaaatgt 350
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 cctgctccctgacgtgacctgcttgagttccagtcctgacttccttcaatatggaaatgt 903
Query: 351 aagctgaataaaccctttcctccccaacttgtttcttgatcatgatgttttgtccagaaa 410
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 902 aagctgaataaaccctttcctccccaacttgcttcttgatcatgatgttttgtccagaaa 843
Query: 411 tagaaaccctgactaagacaaggataaaatccatcctccatctataatcattgccttgct 470
|||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 842 tagaaatcctgactaagacaaggataaaatccatcctccatctat-accattgccttgct 784
Query: 471 agtgtttcttacatgaaaatagatcttggagca-ataacacaaaatttttccttggaaga 529
||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 783 agtatttcttacatgaaaatagatcttggag-agataacacaaaatttttccttggaaga 725
Query: 530 acaagagcccatgttccttctccagaatccatgttaaagaaacagtttttctaggaaaga 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 acaagagcccatgttccttctccagaatccatgttaaagaaacagtttttctaggaaaga 665
Query: 590 gctgctcactggtcagccctaaacatatatacat 623
||||||||||||||||||||||||||||||||||
Sbjct: 664 gctgctcactggtcagccctaaacatatatacat 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1022
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1012
Effective search space: 620356
Effective search space used: 620356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
