Query= MSMg01no471_g07.b1 MSMg01no471_g07.b1 CHROMAT_FILE:
MSMg01no471_g07.b1 PHD_FILE: MSMg01no471_g07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:37 2005
(328 letters)
>mm_chr1_168515342_168516069
Length = 728
Score = 565 bits (292), Expect = e-165
Identities = 318/328 (96%), Gaps = 4/328 (1%)
Strand = Plus / Plus
Query: 1 ctttatctgtactttgtagtgatctttaaagctattttctaatttggtagcatttttata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttatctgtactttgtagtgatctttaaagctattttctaatttggtagcatttttata 260
Query: 61 actgaagtttgcttcatttgtcttcagagacccacagagatagattaggcatatatatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actgaagtttgcttcatttgtcttcagagacccacagagatagattaggcatatatatat 320
Query: 121 ggagagagagagagagacagagagacagagagacagagagacagagagacagagagacag 180
|||||||||||||||| ||||||| ||||||| ||||||| |||||||| ||||||||
Sbjct: 321 ggagagagagagagag--agagagagagagagagagagagagagagagac--agagacag 376
Query: 181 agagacagagagacagagacagagacagagacagagagaaatagacagacagagacagga 240
||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 377 agacagagagagacagagacagagacagagacagagagaaatagacagacagagaccgga 436
Query: 241 gacagagacaccttggaacacaaaggtctaaatgtgatgtctccatcaaattccctcctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gacagagacaccttggaacacaaaggtctaaatgtgatgtctccatcaaattccctcctc 496
Query: 301 cattccaaaagtcaggggaccctgtgga 328
||||||||||||||||||||||||||||
Sbjct: 497 cattccaaaagtcaggggaccctgtgga 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_g07.g1 MSMg01no471_g07.g1 CHROMAT_FILE:
MSMg01no471_g07.g1 PHD_FILE: MSMg01no471_g07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:38 2005
(557 letters)
>mm_chr1_168684758_168685714
Length = 957
Score = 868 bits (449), Expect = 0.0
Identities = 472/481 (98%), Gaps = 4/481 (0%)
Strand = Plus / Minus
Query: 1 tttctgaaactcccaaaagcctgatgcaaaggaactcagtcacctgctcccttttcttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttctgaaactcccaaaagcctgatgcaaaggaactcagtcacctgctcccttttcttga 422
Query: 61 tgtacactctgcctgttaatttgatgggggatttaagcagatttgggggaaactgaagaa 120
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 421 tgtacactctgcctgtttatttgatgggggatttaagcagattttggggaaactgaagaa 362
Query: 121 cccaggcaaaacccatctggatgtttggtgtgatcatggcgtgtggaaactttagttgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cccaggcaaaacccatctggatgtttggtgtgatcatggcgtgtggaaactttagttgct 302
Query: 181 ttcttttgttctttacatagtcactgagataaaatccacatgacaaaattgattattata 240
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 301 ttcttttgttctttacatagtcactgagacaaaatccacatgacaaaattgattattaga 242
Query: 241 agtccttagtatgcatactttggcctttgccaaagggcaagtctctgtctctgtctctgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtccttagtatgcatactttggcctttgccaaagggcaagtctctgtctctgtctctgt 182
Query: 301 ctctctcttcgtctctctct-cc---ctctctctctctttcttcctgatttataaggctg 356
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 181 ctctctcttcgtctctctcttcctctctctctctctctttcttcctgatttataaggctg 122
Query: 357 tgttttaatgataacccatactatattcatttatcattttatcatatatgtatatgtatt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgttttaatgataacccatactatattcatttatcattttatcatatatgtatatgtatt 62
Query: 417 tagatatcattatctagactcatatagttaccatatgaaaatccccaccaccaccatcaa 476
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 61 tagatatcattatctagactcatatagttaccgtatgaaaatccccaccaccaccatcaa 2
Query: 477 a 477
|
Sbjct: 1 a 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
