ATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGAGATCAGCCTGCACAAACAGTACTCTTAATTGTGTGGAATCAG
ACCTGAGGTCACCACTCTGACCATGCATTGACCTAAACTTGCTCTGTCCC
AGACTGACTTGAACCCAGGAATCTGCATGTTTTTGTACACACAAACAATA
AGCTTAGCTGGGCAGAACCTTGTCCTGAAATCACTACTCCCTAAAACTCT
TTATCTCCTTCCTTAATAGCTTTTTGAAAAACTGGTTCATTAGTGCAGCT
GCTTCTGTTCTTTATGCCCATGAAGCTTCTCATACAATTTATATTGCATC
CTTATATTGTTCATAGTTTAGAAATCCTGTAAAGTTCAGATCTTGTACTG
GTTTATGTATTTTTTCATTCATGTTTTCAGAGTTCTTTCCCACAGCCTTA
AAGGCTTTTTGAAAGTATTAGCATCACAGAGACATATTCTTGATTTTCTG
AGTCATGCTGTCTTTTATTATCATGGAGTCATTAACATTGACAGGGAGGA
CATTTCCTAGAAAGGAGGAGCATTAAGTAAAGTAAGTACATTATTACACA
CATAAGCCCTATGTGTAGCAACCATCAACATTTGTAGAGGCCCAAGCCCA
GCTGGCTCTGCTATGGAGGTGAGGGAGCTTTTATGCTGTCCTTTCTGTTT
CCATGCAGGACTTGGCACAAAAGCAAGTTGGGGAAGAAATGATATATTT

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTGAGTTCGAGGCCAGCCTGGTCTACAGA
ATGAGTTCCAGGACAGCCACTGCTACACAGGGAAACCCTGTCTCAAAACA
AACAAACAAACAAACAAAAAAGAAAACAAAAAATCAATTACTTCATGAAT
TTCTTCATCCTGAGTGAGGTAACCCAATCACAAAAGAGCACACATGGTAT
GCACTCAACGATAAGTGGATATTAGCCCAAAAGCTCTAAATACCCAAGAT
ACAATTCATAGATTACATAAAGCTCAAGAATAAGGAAAACCAAAGTATGG
ACACTTCAGTCATTTTTTGAAGTATGAACAAAATACTCATGGGAGGAAAT
ATGGAGACAAGTGTGGAGCAGATACTTAAGGAAAGGTTACCTCTGATTTT
TCTGTGGTTTCAAAGTCATTTAATGGAATGTCTCCAGAGACTTATCCCTA
GCCCACTGTACATCCTGCCCTATTTCATCTAGTAACTTATTATTTCACTT
TTGTCTTCATCAACCAGTAGCTCAAGGCAAACCTCTTAAATATATTTGCT
CCTTCTCTCTCCATCTCATCCCATATATACAACATTCTAGAATATCATAG
GTAGATCATGTATTGACTGAGCTAATTCTTTTTTTTTACTTCTTTTGTTT
TATTGGATATTTTCTTTATTTACATTTCAAATGTTATCTCCTTTCN

Query= MSMg01no471_n14.g1 MSMg01no471_n14.g1 CHROMAT_FILE:
MSMg01no471_n14.g1 PHD_FILE: MSMg01no471_n14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:15 2005
         (674 letters)



>mm_chr1_102740360_102741434
          Length = 1075

 Score = 1031 bits (533), Expect = 0.0
 Identities = 557/565 (98%), Gaps = 2/565 (0%)
 Strand = Plus / Minus

                                                                        
Query: 111  atcaattacttcatgaatttcttcatcctgagtgaggtaacccaatcacaaaagagcaca 170
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 atcaattacttcatgaatttcttcatcctgagtgaggtaacccaatcacaaaagagcaca 1016

                                                                        
Query: 171  catggtatgcactcaacgataagtggatattagcccaaaagctctaaatacccaagatac 230
            |||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 1015 catggtatgcactcaatgataagtggatattaacccaaaagctctgaatacccaagatac 956

                                                                        
Query: 231  aattcatagattacataaagctcaagaataaggaaaaccaaagtatggacacttcagtca 290
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 955  aattcatagattacataaagctcaagaataaggaaaaccaaagtatggagacttcagtca 896

                                                                        
Query: 291  ttttttgaagtatgaacaaaatactcatgggaggaaatatggagacaagtgtggagcaga 350
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895  ttttttgaagtatgaacaaaatactcatgggaggaaatatggagacaagtgtggagcaga 836

                                                                        
Query: 351  tacttaaggaaaggttacctctgatttttctgtggtttcaaagtcatttaa-tggaatgt 409
            |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 835  tacttaaggaaaggttacctctgattgttctgtggtttcaaagtcatttaaatggaatgt 776

                                                                        
Query: 410  ctccagagacttatccctagcccactgtacatcctgccctatttcatctagtaacttatt 469
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775  ctccagagacttatccctagcccactgtacatcctgccctatttcatctagtaacttatt 716

                                                                        
Query: 470  atttcacttttgtcttcatcaaccagtagctcaaggcaaacctcttaaatatatttgctc 529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715  atttcacttttgtcttcatcaaccagtagctcaaggcaaacctcttaaatatatttgctc 656

                                                                        
Query: 530  cttctctctccatctcatcccatatatacaacattctagaatatcataggtagatcatgt 589
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655  cttctctctccatctcatcccatatatacaacattctagaatatcataggtagatcatgt 596

                                                                        
Query: 590  attgactgagctaattcttttttttt-acttcttttgttttattggatattttctttatt 648
            ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 595  attaactgagctaattcttttttttttacttcttttgttttattggatattttctttatt 536

                                     
Query: 649  tacatttcaaatgttatctcctttc 673
            |||||||||||||||||||||||||
Sbjct: 535  tacatttcaaatgttatctcctttc 511


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1075
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1065
Effective search space:   707160
Effective search space used:   707160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)