Query= MSMg01no472_l11.b1 MSMg01no472_l11.b1 CHROMAT_FILE:
MSMg01no472_l11.b1 PHD_FILE: MSMg01no472_l11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:26 2005
(271 letters)
>mm_chr1_70669083_70669753
Length = 671
Score = 230 bits (119), Expect = 6e-65
Identities = 125/127 (98%)
Strand = Plus / Minus
Query: 4 ggaattcttcactttcctagcctattaaaaatttcaacacagaatgagtttggcttgatt 63
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ggaattcttcactctactagcctattaaaaatttcaacacagaatgagtttggcttgatt 271
Query: 64 gtattctaatttcacgaaaaatacagtgttgtgtcagagaagttttctcaaatacaaata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gtattctaatttcacgaaaaatacagtgttgtgtcagagaagttttctcaaatacaaata 211
Query: 124 taatgaa 130
|||||||
Sbjct: 210 taatgaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 671
Length adjustment: 9
Effective length of query: 262
Effective length of database: 662
Effective search space: 173444
Effective search space used: 173444
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no472_l11.g1 MSMg01no472_l11.g1 CHROMAT_FILE:
MSMg01no472_l11.g1 PHD_FILE: MSMg01no472_l11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:27 2005
(450 letters)
>mm_chr1_70556190_70557039
Length = 850
Score = 808 bits (418), Expect = 0.0
Identities = 442/454 (97%), Gaps = 9/454 (1%)
Strand = Plus / Plus
Query: 1 tcctatgacatagggtgctcagaagagcacttgtcatagcatgtaattcataatttgata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctatgacatagggtgctcagaagagcacttgtcatagcatgtaattcataatttgata 260
Query: 61 atccttgactacttatattatacaagtcatgtgtccttggaatataggtatatatgatat 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 atccttgactacttatattatacaagtcatgtgtctttggaatataggtatatatgatat 320
Query: 121 ttaaaaaatttttttaaatgctgcaacccttatagtttaattttgtgccacttcagcatc 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaaaaa-tttttttaaatgctgcaacccttatagtttaattttgtgccacttcagcatc 379
Query: 181 tcatttcatacaaacaaatggtgtccataattgaacaattttcttttaaaaataaattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcatttcatacaaacaaatggtgtccataattgaacaattttcttttaaaaataaattaa 439
Query: 241 aatttttttaa----tgaggctaggaaatgagttagtgaatgcttattataacttcctat 296
||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aattt----aaagaatgaggctaggaaatgagttagtgaatgcttattataacttcctat 495
Query: 297 agagcatgttggcccctagagaccagggaatattttgcattttggtcacttttcctttgc 356
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 496 agagcatgttggcccctagagaccaggcagtattttgcattttggtcacttttcctttgc 555
Query: 357 agagataatgagggtggggacctttcacaactgcaggcaacagctttgagctctaaggac 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 agagataatgagggtggggacctttcacaactgcaggcaacagctttgagctctaaggac 615
Query: 417 tttgaagatattagctctattgatattctctcca 450
||||||||||||||||||||||||||||||||||
Sbjct: 616 tttgaagatattagctctattgatattctctcca 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
