GTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGAGACTCCGCGG
AATTCATGAAATCCTTCCGCAAATGGATGGATCTGTAAGGTATCATCCTG
AGTGAGGTAACCCAATCACAAAAGAACACACATGATATGCATTCACTGAT
AAGTGGATATTAGTCCACAAACTTAGAGTACCCTAGATACAATTTGCAAA
ACACATAAAACTCAAGAAGAAAGAAGACCAAGTGTGGATACATCGTACCT
TCTTAGAATGGAGAACAAATATTCATGGAAGGAGTTACAGAGACAAAGTT
CAGAGCTGAGACAGAAGGAAGGATCTTTTTGAGACTGCCCCACCCGGGGA
TCCATCCCATAATCAGCTACCAAACCCAGTCACTATTACATATGCCAGCA
AGATTTTGCTGACAGGACCCTGATATAACTCTCTCTTGTGAGGCTATGCC
AGTGCCTGACTAATACAGAAGTGGATGCTTAGAATCATCTATTGGATGGA
TCGCAGGGCCCCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAG
GGGTCTCCAACCCTATAGTAGGATCAACAATATGAACTAACCAGTACCCC
CCAGAGCTTGTGTGTCTAGTTGCATATGTAGCAGAGGATGGCCTATTCGG
CCATCAATGGGAGTAGAGGCCCTTGGCCTTGCGAAGATCATATGCTCCAG
TACAGGAGAATGCCACGGCCAGGAAGCATGAGTGGCTGGATTGGTTAGCT
GTGCAG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCTGAAGTTAGAGTTATAGAGACT
TATGATCCATTAAATATGGATGCGTGGAACTGCACTCTGGTCCTCTTGAA
GAATAGCAGATATGATCCATGCTGAATCATCTTTTCAGCCCCAAACATGT
CTTTTTAAAATTAGGAAAACATGAGCATCACTAAAATTAAATTTAAATCT
ATAACCTTGCAAAGTGGTCTACCATAACTTGTACAATTTCCAATGTTCTA
AAAGCTGCAATAGAAAGGGAAAATGAGATAATTGCTACCAACACTGAAAT
AAAAAGAAGCAATCCCATTTTACTAACGCTACATTGTATGCTTTTAAAAC
TCAAGAATGAGAGAGGAACATTAACAATTGTAAGCTTGCTACTGAGAGAA
AACACAGTATTCCATATATTAGAATCTATATAATTTTCTAAACTCTGAGA
TGCAAATCTTGATCTAAGGGGAATAGTGAGACACAGGCAGCAACAGTTAT
ATCAGCAGTATGCTTTTACTATAGATGCAGTTCACCTGGTTGAACTGCAA
AGTATTATCATTGAAATTTAATAAGTTACTATTCTTTGAGAAACATTAGA
AAACAACATGTAATAATATGCAAGATGATGACACTTATAACCACGAAATA
GAAACTATTCAAGAAAAGTGAGGTGCTGGGAAAATGCTAAGTGAGGAAGA
TACTCGCTGGCGAAATCAATGGG

Query= MSMg01no473_l11.g1 MSMg01no473_l11.g1 CHROMAT_FILE:
MSMg01no473_l11.g1 PHD_FILE: MSMg01no473_l11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:55 2005
         (573 letters)



>mm_chr1_125039020_125039992
          Length = 973

 Score = 1093 bits (565), Expect = 0.0
 Identities = 571/573 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctgaagttagagttatagagacttatgatccattaaatatggatgcgtggaactgcact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgaagttagagttatagagacttatgatccattaaatatggatgcgtggaactgcact 260

                                                                       
Query: 61  ctggtcctcttgaagaatagcagatatgatccatgctgaatcatcttttcagccccaaac 120
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 ctggtcctcttgaagaatagcagatatgatccatgctgaaccatcttttcagccccaaac 320

                                                                       
Query: 121 atgtctttttaaaattaggaaaacatgagcatcactaaaattaaatttaaatctataacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtctttttaaaattaggaaaacatgagcatcactaaaattaaatttaaatctataacc 380

                                                                       
Query: 181 ttgcaaagtggtctaccataacttgtacaatttccaatgttctaaaagctgcaatagaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgcaaagtggtctaccataacttgtacaatttccaatgttctaaaagctgcaatagaaa 440

                                                                       
Query: 241 gggaaaatgagataattgctaccaacactgaaataaaaagaagcaatcccattttactaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggaaaatgagataattgctaccaacactgaaataaaaagaagcaatcccattttactaa 500

                                                                       
Query: 301 cgctacattgtatgcttttaaaactcaagaatgagagaggaacattaacaattgtaagct 360
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgatacattgtatgcttttaaaactcaagaatgagagaggaacattaacaattgtaagct 560

                                                                       
Query: 361 tgctactgagagaaaacacagtattccatatattagaatctatataattttctaaactct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgctactgagagaaaacacagtattccatatattagaatctatataattttctaaactct 620

                                                                       
Query: 421 gagatgcaaatcttgatctaaggggaatagtgagacacaggcagcaacagttatatcagc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagatgcaaatcttgatctaaggggaatagtgagacacaggcagcaacagttatatcagc 680

                                                                       
Query: 481 agtatgcttttactatagatgcagttcacctggttgaactgcaaagtattatcattgaaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtatgcttttactatagatgcagttcacctggttgaactgcaaagtattatcattgaaa 740

                                            
Query: 541 tttaataagttactattctttgagaaacattag 573
           |||||||||||||||||||||||||||||||||
Sbjct: 741 tttaataagttactattctttgagaaacattag 773


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space:   542169
Effective search space used:   542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)